Solanum lycopersicum (tomato): 778276
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Entry
778276 CDS
T02665
Symbol
SNF1
Name
(RefSeq) SNF1 protein
KO
K07198
5'-AMP-activated protein kinase, catalytic alpha subunit [EC:
2.7.11.31
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sly01001
]
778276 (SNF1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
778276 (SNF1)
03029 Mitochondrial biogenesis [BR:
sly03029
]
778276 (SNF1)
Enzymes [BR:
sly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.31 [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase
778276 (SNF1)
Protein kinases [BR:
sly01001
]
Serine/threonine kinases: CAMK group
CAMKL family
778276 (SNF1)
Membrane trafficking [BR:
sly04131
]
Autophagy
Other autophagy associated proteins
Others
778276 (SNF1)
Mitochondrial biogenesis [BR:
sly03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
778276 (SNF1)
Mitophagy factors
Other mitophagy factors
778276 (SNF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
KA1
Kinase-like
AdenylateSensor
UBA
ABC1
UBA_BRSK
UBA_2
AMPK_alpha_AID
UBA_3
DUF4954
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
778276
NCBI-ProteinID:
NP_001304105
UniProt:
Q9M726
LinkDB
All DBs
Position
2:complement(53415575..53427081)
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AA seq
514 aa
AA seq
DB search
MDGTAVQGTSSVDSFLRNYKLGKTLGIGSFGKVKIAEHTLTGHKVAVKILNRRKIRNMDM
EEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEAR
NFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWNVKIADFGLSNIMRDGHFLKTSCGSP
NYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHL
SAGARDLIPRMLIVDPMKRMTIPEIRLHPWFQAHLPRYLAVPPPDTTQQAKKIDEEILQE
VVKMGFDRNNLTESLRNRVQNEGTVAYYLLLDNRHRVSTGYLGAEFQESMEYGYNRINSN
ETAASPVGQRFPGIMDYQQAGARQFPIERKWALGLQSRAHPREIMTEVLKALQELNVCWK
KIGQYNMKCRWVPSLPGHHEGMGVNSMHGNQFFGDDSSIIENDGATKLTNVVKFEVQLYK
TREEKYLLDLQRLQGPQFLFLDLCAAFLAQLRVL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggacggaacagcagtgcagggcaccagcagtgttgactcatttttacggaactataaa
ctcgggaaaacacttggcattggatcgttcggcaaagttaaaatagctgaacatacgtta
acagggcacaaagttgctgtcaagattcttaatcgtcgaaaaatcaggaatatggacatg
gaggagaaagtccgtagagaaatcaaaatattgagattgttcatgcatcctcatattata
cggctttatgaggtcatagagacaccatcagatatatatgttgtgatggagtatgtgaaa
tctggcgagttatttgattacattgttgagaagggcagattgcaggaggatgaagctcgt
aacttttttcagcagataatttctggtgtggagtactgccatagaaacatggtggttcat
agagaccttaagcctgaaaacctccttctggactccaaatggaatgtgaagatcgcagat
tttggtttgagcaatatcatgcgcgatggtcattttctgaagacaagttgcggaagccca
aactatgctgccccagaggttatatcaggtaaattgtatgctggccctgaggtagatgta
tggagctgtggtgttattctttatgctcttctctgtggcacccttccgtttgacgatgaa
aacatacccaatctttttaagaaaataaagggtggaatatatactctgcccagccattta
tcagctggtgcgagggatttgattccgaggatgcttatagtcgacccaatgaagcgaatg
actattcctgagattcgcctgcacccttggttccaagctcatttgccacgctatttggcc
gtgcctccaccagatacaacccaacaagcaaagaagatcgatgaagagattcttcaagag
gtggttaagatgggatttgacaggaacaaccttactgagtctcttcgcaatagagttcaa
aatgagggcactgttgcatactatctgctcctggacaatcgccatcgtgtttccactggc
tatcttggagctgaatttcaggagtccatggaatatggttacaaccggatcaattctaat
gaaaccgctgcttcccctgttggtcaacgtttcccaggaataatggattatcagcaagct
ggtgcaagacagttccccattgaaagaaaatgggctcttggcctccagtctcgagcgcat
ccacgtgaaataatgactgaagttttgaaagctctgcaagaactgaatgtatgttggaaa
aagattggtcagtataacatgaaatgtcgatgggttcctagcttacctggtcatcatgaa
ggcatgggtgttaattccatgcatgggaatcagttctttggagatgattcatccatcatt
gagaatgatggggccacaaagttaacaaatgtggtcaagtttgaagttcagctttacaaa
accagggaggagaagtacttgcttgaccttcagagacttcagggtccacaattcctcttc
ctggatctctgtgctgcttttcttgctcagcttcgagtactttaa
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