Solanum lycopersicum (tomato): 778293
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Entry
778293 CDS
T02665
Symbol
9612
Name
(RefSeq) probable pectate lyase P18 precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
778293 (9612)
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
778293 (9612)
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
778293
NCBI-ProteinID:
NP_001234029
UniProt:
P24396
A0A3Q7FBV8
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Position
2:complement(70728303..70730195)
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AA seq
404 aa
AA seq
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MSTLFFTFSLLLLAPLLVISSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDDCW
RCNPNWEKNRQRLADCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEP
LWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCKQ
SGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISN
NYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFR
QTGAGASSSSTYARASSLSARPSSLVGSITTNAGPVNCKKGSRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtctactcttttcttcacattttccctccttcttctagcaccactactcgtaattagt
tcaatccaagatccagaacttgttgtacaagacgttcataggagcatcaatgcgtcattg
acgaggaggaatttgggctatttatcgtgcggatcagggaatccaatcgatgattgctgg
cgatgcaaccccaattgggaaaaaaatcgccagcgtttagctgattgcgccattgggttt
ggaaagaatgctatcggaggaaaaaatggccgaatttacgtggttactgattcagggaac
gatgaccccgtgaaccctaaacccggaaccctgagacatgctgttatacaagacgagcct
ttatggattattttcaaaagagatatggtcattcagctcaaacaagagcttgtcatgaac
tcttataagaccatagatggtcgtggtgcgagtgttcacatttcaggtggtccgtgcatt
acaatccaccataccagcaacattataatacacgggattaatatacacgattgtaaacag
agtggtaacggcaacattagggactcaccaaaccattccggatggtgggatgtttctgat
ggtgatggtatttcaatttttggagggaaaaacatttgggtggaccattgttcgttgtct
aattgccacgacggtttaattgatgcaattcacggatctacagcaatcacgatatctaac
aactatttcactcatcatgacaaggtgatgttgttgggacatagtgattcttttacacag
gacaaaggcatgcaagtcacagttgcttttaatcattttggtgaagggttggtgcaaaga
atgccaaggtgcagacatggttacttccatgtggttaataatgactatactcactgggaa
atgtatgccattggtggtagtgctgcacctactattaatagccaaggaaacagatttctt
gctcccaatgaaaaataccgcaaagaggtgacaaagcatgaggatgcaccagaaagtcag
tggagaagctggaactggagatcagaaggtgatttgatgttaaatggagcgtatttcagg
caaacaggggcaggtgcatcatcatcatctacttatgccagagcttcaagcttaagcgct
aggccttcttctttagttggatcaattaccacaaatgccggtcctgttaactgcaaaaaa
ggctctcgctgctag
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