Solanum lycopersicum (tomato): 778307
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Entry
778307 CDS
T02665
Symbol
DEF
Name
(RefSeq) floral homeotic protein DEFICIENS
KO
K09264
MADS-box transcription factor, plant
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sly03000
]
778307 (DEF)
Transcription factors [BR:
sly03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
778307 (DEF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
L31
PLU-1
FUT8_N_cat
WHD
Taeniidae_ag
Prominin
PUMA_CC
Herpes_BLRF2
Motif
Other DBs
NCBI-GeneID:
778307
NCBI-ProteinID:
NP_001234077
UniProt:
Q2UVA8
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All DBs
Position
4:66950866..66954462
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AA seq
228 aa
AA seq
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MARGKIQIKKIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIVMISSTGKLHEFISP
SITTKQLFDLYQKTIGVDIWTTHYEKMQEQLRKLKDVNRNLRKEIRQRMGESLNDLNYEQ
LEELMENVDNSLKLIRERKFKVIGNQIETYRKKVRNVEEINRNLLLEFDARQEDPYGGLV
EHDGDYNSVLGFPTGGPRILDLRLQPNNNYHNHLHSGGGSDITTFALG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtggtaagatccagatcaagaaaatagaaaaccaaacaaatagacaagtgact
tattcaaagagaagaaatgggctattcaagaaggctaatgaacttactgttctttgtgat
gctaaagtttcaattgttatgatttctagtactggaaaacttcatgagtttataagtccc
tctatcacgaccaaacaattgttcgatctgtaccagaagactattggagttgatatttgg
actactcactatgagaaaatgcaagagcagctaaggaagctaaaggatgtgaataggaat
ctacgaaaagagatcagacagaggatgggagaaagcctaaatgatctgaactatgaacag
ttggaagaactcatggaaaatgtggacaattctctgaagcttattcgtgaaagaaagttt
aaggtgattggcaatcagattgaaacttacaggaaaaaggttaggaatgtggaagaaata
aatagaaatctcctacttgaatttgatgcaagacaagaggatccatatggtggattagtt
gagcatgatggagactacaattccgtgcttggatttccaactggagggcctcgtatatta
gacttacgccttcaacccaacaacaattatcataatcatcttcacagtggaggtggctct
gatattactacttttgctctaggttga
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