Solanum lycopersicum (tomato): 778357
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Entry
778357 CDS
T02665
Symbol
LysRS
Name
(RefSeq) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
778357 (LysRS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sly01007
]
778357 (LysRS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sly03016
]
778357 (LysRS)
Enzymes [BR:
sly01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
778357 (LysRS)
Amino acid related enzymes [BR:
sly01007
]
Aminoacyl-tRNA synthetase
Class II (A)
778357 (LysRS)
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
778357 (LysRS)
Prokaryotic type
Other AARSs
778357 (LysRS)
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Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
778357
NCBI-ProteinID:
NP_001234285
UniProt:
Q43776
LinkDB
All DBs
Position
10:complement(58635384..58639152)
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AA seq
588 aa
AA seq
DB search
MDSSVSTEPLSKNALKREKKAKEKEQLEQEKKAAAVAKRQMEQHNLPENDDLDPTQYLAN
RLRNIESLRESGINPYPHKFFITMSIPEFISRYAHLNTGEFPEDIDMSLAGRVISKRASS
SKLYFYELLGGGARVQVLASARDSDVDAVQFSNYQSGVKRGDIIGVRGYPGKSKRGELSI
FAKPFIVLAPCLHMLPRRLTSSIVDETRTQNFQGITAYDTWTPGDLRNPESYVLRDQETR
YRQRYLDLMMNPEVRALFRTRARIISYIRSFLDNLEFLEVETPSMNLTAGGASARPFITH
HNELDTELLIRVSPELYLKKLVVGGFDRVYELGKHFRNEGMDLTHSPEFTMCELYMAYAD
YNDLMDLTEQLLSGMVKDLTGSYKIRYHANGLDNEPIEIDFTPPFRKIDMLSELEKVANI
SIPRDLSSESANKHLVDVCEKFDVKCPPPHTTTRLLDKLVGHFIEVNCINPTFIINHPEI
MSPLAKSRRSEPGLTERFNLFVNRRELCDAYTELNDPTAQRERFAEQLKDRQLGDDEAMD
LDESFITALEYGLPPTGGLGMGIDRLTMLLTDSQNVKEVILFPAMRLQ
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggattcatctgtttcaacagagccactaagcaagaatgctcttaagagagaaaagaag
gcaaaggaaaaggagcaacttgaacaggaaaagaaggcagcagcagtagctaaaaggcaa
atggagcaacacaatttacctgagaatgatgatttggatcctactcaatacttggcgaac
agattgaggaacattgagtcgttgagagaatctggaatcaatccatatccacataagttc
ttcattacaatgtctattcctgaatttattagcagatatgctcatctaaatactggagag
tttcctgaagacattgatatgtccttagcagggagagtgataagcaagcgagcatcatcg
tcaaaactctatttctatgaactgcttggtggtggggcgagagtacaagtactggctagt
gcaagggattctgatgtggatgctgttcagttttctaattatcagtctggagtgaagcga
ggtgacatcattggtgtccgcggatatcctggaaagagtaagagaggagagctaagtatc
tttgcaaaaccttttatagttctagccccttgcctacacatgttaccgaggcggctgacc
tcctctatcgtagatgaaactcggacacagaatttccaaggaataacagcttatgatact
tggactccaggagatctgagaaaccccgagtcttatgtgttaagggatcaggaaactcgg
tatcgtcaaaggtacttagatctaatgatgaatccagaagttcgagctttgtttaggact
cgcgccagaatcatttcttacatcaggagtttcctcgataatcttgagtttctggaggtg
gagacaccttctatgaatttgacagctggaggagcttcagccagaccatttatcactcac
cataacgagttggacacagaactcctcatacgtgtttcccccgagctttatcttaagaag
ttagttgttggtggattcgaccgtgtttatgagctggggaagcatttcaggaatgaagga
atggatttaactcactctcctgagttcacaatgtgtgaactttatatggcttacgctgat
tacaacgatttgatggatttgacagagcagctactatcaggtatggtgaaggacctaacc
ggaagctataaaataaggtaccatgctaatggcttggataatgaaccgatagaaattgat
ttcactcctccattcagaaagattgatatgttgtcggagttggagaaagtggctaacatc
agtatacctagagatctatcgagtgaaagtgctaacaagcacttggtagatgtatgtgag
aagttcgatgtcaaatgccctccacctcataccacaacacgattactcgataagctagtt
ggtcattttattgaagtaaactgcataaatcccacttttattatcaaccatcctgagatc
atgagcccactggctaaatcacgcagatcagaacctggtttgactgagcgcttcaactta
ttcgttaacagaagagagctatgtgatgcctatactgaactaaatgatcctacagcacag
agagaacgctttgctgaacaattaaaggacagacaattaggagacgacgaggcaatggat
ttggatgaatcctttataactgcattggagtatggattaccccctactggtggactaggc
atggggattgatagacttacaatgttgcttacagattcacaaaatgtcaaggaagttatc
ctctttccagccatgagattacaatga
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