Solanum lycopersicum (tomato): 778360
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Entry
778360 CDS
T02665
Symbol
GGPS2
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 2
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00900
Terpenoid backbone biosynthesis
sly01100
Metabolic pathways
sly01110
Biosynthesis of secondary metabolites
Module
sly_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
778360 (GGPS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sly01006
]
778360 (GGPS2)
Enzymes [BR:
sly01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
778360 (GGPS2)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
778360 (GGPS2)
2.5.1.29 geranylgeranyl diphosphate synthase
778360 (GGPS2)
Prenyltransferases [BR:
sly01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
778360 (GGPS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
778360
NCBI-ProteinID:
NP_001234302
UniProt:
A0A3Q7GAW6
Q1A7S9
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All DBs
Position
4:complement(66137663..66138955)
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AA seq
363 aa
AA seq
DB search
MRSMNLVDSWGQACLVINQSLPYNSFNGLMKINSKNRKILQQSLSYRTFSSVTVSAIATN
EKVVMEKEEFNFKVYVAEKAICVNKALDEAIMVKDPPKIHEAMRYSLLAGGKRVRPMLCL
AACELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLA
GDALLAFAFEYLATATTGVSPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEM
LEFIHIHKTAALLEASVVIGAILGGGADEEVDKLRRFAQCIGLLFQVVDDILDVTKSSSE
LGKTAGKDLAVDKTTYPKLLGLEKAKEFAAELNGEAKQQLAAFDSHKAAPLIALADYIAN
RQN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagatctatgaaccttgttgattcatggggtcaagcttgtctagttatcaatcaatct
ttaccttacaattcgtttaatggattgatgaaaatcaattcgaaaaatcgaaaaattttg
caacagagtttatcttatagaacattttcatctgtaactgtttcagctattgctaccaat
gagaaagttgttatggaaaaagaagaatttaatttcaaggtttacgtagctgaaaaggcg
atttgtgtaaataaagctttggatgaggctataatggtaaaagacccacctaagatccat
gaagcaatgcgttattcgcttctcgccggcgggaagagagtccggccgatgctctgtctt
gctgcctgtgaacttgttgggggaaaccaagggaatgctatggcggctgcttgtgctgtt
gagatgatacatactatgtctctaattcatgatgatttgccttgtatggatgacgacgat
ctccgccgtggaaagccgacgaatcataaagtgtacggtgaggatgtggcggtcctcgcc
ggagatgcgctacttgctttcgcattcgagtacctcgctaccgctacaaccggagtttct
ccgtcgaggatcctcgttgctgtcgccgaattggcgaaatctgttggaactgaagggtta
gtagctggacaagtagcggatttagcttgtactggtaaccctaatgtgggattagaaatg
cttgaattcattcacatacacaaaacggcggcgttgctagaagcttccgttgtaatcgga
gcaatcctcggcggcggagctgatgaagaagtggataagttaaggagatttgcccaatgc
atcggtttattgtttcaggtagttgatgatatccttgacgtgacaaagtcatcgtcggag
ctcggaaaaaccgccggaaaagatttggcggttgataaaacgacgtatccgaagctgctg
ggattggaaaaggctaaggaatttgcggcggagctcaacggcgaagctaaacaacagctg
gcggcgtttgattcacacaaagctgctccattgattgctttagcagattacattgctaat
cgtcaaaattaa
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