Staphylococcus lutrae: B5P37_00525
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Entry
B5P37_00525 CDS
T04991
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
slz
Staphylococcus lutrae
Pathway
slz03410
Base excision repair
slz03430
Mismatch repair
slz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B5P37_00525
03430 Mismatch repair
B5P37_00525
03440 Homologous recombination
B5P37_00525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slz03400
]
B5P37_00525
DNA repair and recombination proteins [BR:
slz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B5P37_00525
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B5P37_00525
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B5P37_00525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
HTH_11
DSPc
Motif
Other DBs
NCBI-ProteinID:
ARJ49942
UniProt:
A0AAC9RUD4
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Position
complement(97745..100039)
Genome browser
AA seq
764 aa
AA seq
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MKEMIKSKYKWQTIQNDCKIEQEVSDQFKLTPIMRNILESKGYTTAEQIAQILDCTKQSA
HEPGRLSDMEKVVNRIHTAIQKQEKILVYGDYDADGVTSTTIMVKTLQQLGAVVGWYIPN
RFTEGYGPNELAFKNAYDEGVTLIITVDNGIQGHAEIEMIQQRGVDVIVTDHHEMGDTLP
SAYAIVHPMHPDFDYPFHSLCGAGVALKLAQSLLDDIPKSFWIYAMIGTIADLVSLTDEN
RYIVRQGLKEINLQAPHAIAAILKQAQHQDDITEETIGFIIGPRLNAVGRLDDAALAAEL
LMTEDKEEALFLAEQVEHFNIERKAIVKTIVDEAMLMAEALIQEGQQFLVLANEDWHEGV
LGIVASRIVETFHLPTMVLNIDQHQQHAKGSARSISQVSMFQALSAQQHLITKFGGHHMA
AGLTLPIDQVDALRAALNDWMHNHVKGDELQPIQRVDVVLSTDDITVDQIQSIERLRPFG
TDFNRPVFQVNQLTIQQCKAIGQQQAHLKLTFNEQHLQALFWNQGAFSNELMSGQHLDVT
GTLQINEWNGQRTPQMILTDIKSNERQILDYRSKNKRLPLFDEAARVCFLIHPNRDKQSP
HDYYYGEAIPEMYEKCIMRDLPLTLEDVQLSCRYLNTSQIYLVFQHQRSIYFEGLPQDDE
FKKCYKALYQKGRTDLEKEGLALSQFIHVKPMMLKFILKVFLDLGLISQKNGIIEIVHST
DKQPIRSSRVYQARVQRIEVEKQLLYEEFGAIKSWIENELARNE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagagatgattaaatctaaatacaaatggcaaacgatccaaaacgattgtaagatc
gagcaagaggtcagtgaccaatttaaattaacacccatcatgcgaaatattttagaaagt
aaaggctacacgacagctgaacagattgcacaaattttagattgtacaaaacaatccgcg
catgagccggggcgattaagcgacatggaaaaagttgtgaatcgtatacatacagccatt
caaaagcaagagaaaattcttgtatacggcgattacgatgcagacggtgtgacttctaca
acgataatggtaaagacgctacaacaactcggtgcagttgtcgggtggtatattccaaat
cgttttactgaaggatacgggcccaatgaactggcttttaaaaatgcttatgatgaaggc
gtcacacttattatcacagtcgacaacggcattcaaggtcatgcagaaattgaaatgata
caacaacgcggtgtcgatgtgattgtgactgaccatcacgaaatgggtgatacgttacct
tctgcttatgccatcgttcaccctatgcaccctgattttgactatccattccatagttta
tgtggtgcgggagtcgcattaaaattagcacaaagtttattagatgacattccgaaatca
ttctggatttatgccatgattgggacgattgcggatttagtatccttaacggatgaaaat
cgttatatcgttcgtcaaggccttaaagaaatcaatcttcaagcacctcacgcgatagca
gcgattttgaaacaagcgcaacaccaggatgatattactgaggaaacaattggttttatc
attggaccgagattaaatgctgttgggcgacttgatgatgccgcccttgctgctgaacta
ttgatgacagaggacaaggaagaagcattgtttctagctgaacaggtagaacattttaat
attgagcgcaaagctattgtgaagacgattgtagatgaggccatgttgatggctgaggca
ttgattcaagaggggcagcaatttctagtgttagcaaatgaagattggcatgaaggtgtg
cttgggattgtggcttccagaattgtggagacttttcacttgccgacgatggttttaaat
atcgatcaacatcaacaacatgccaaaggttctgctcgaagtatttcgcaagtctctatg
tttcaagcattatcggcacaacaacatttgataactaaattcggtggtcatcatatggca
gccggtttaacactgcctatcgatcaagtagatgccttacgagcagcgcttaatgactgg
atgcacaatcatgtgaaaggggatgaattacaacccatacaacgggttgatgtcgtttta
tcaaccgatgatattacggttgaccaaattcaatctatcgaaagactgcgcccctttggt
acggattttaatagacccgtttttcaagtcaatcagttaacgattcaacaatgtaaagct
ataggtcaacaacaagcacatttaaaattgactttcaatgaacagcatttacaagcgctt
ttttggaatcaaggggcattttcaaatgagttaatgtcaggacaacatttggacgtgact
ggtacattacaaataaacgaatggaatggtcaacgcacgcctcaaatgatattaacagat
ataaaaagtaatgagcgacaaattttagattatcgtagcaaaaataaacgtttaccttta
tttgatgaagcggcacgtgtctgttttctcattcatcctaatcgtgataagcagtctccc
catgattattattatggagaagcgattccagaaatgtatgaaaaatgtatcatgcgtgac
ttgccactcacattggaagatgttcaattatcttgtcgttatttaaatacatcccaaatc
tatctcgtctttcaacatcaacgttcaatttattttgaaggtcttccacaagacgatgaa
tttaaaaaatgttataaagcattgtatcaaaaagggcggactgatttggaaaaagaaggt
cttgcgctcagccaatttattcatgtcaaaccgatgatgttaaaatttattttaaaagtt
tttcttgacttaggactcatttctcaaaaaaatggtataatcgagattgtgcattcgact
gataaacaaccgatacgttcgagtcgtgtttatcaagcacgtgttcaacgtattgaagta
gaaaaacagttattgtatgaagagtttggtgccattaagtcttggatagaaaatgagttg
gcaaggaatgaatga
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