Staphylococcus lutrae: B5P37_02400
Help
Entry
B5P37_02400 CDS
T04991
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
slz
Staphylococcus lutrae
Pathway
slz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5P37_02400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slz03019
]
B5P37_02400
03009 Ribosome biogenesis [BR:
slz03009
]
B5P37_02400
Enzymes [BR:
slz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B5P37_02400
Messenger RNA biogenesis [BR:
slz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B5P37_02400
Ribosome biogenesis [BR:
slz03009
]
Prokaryotic type
rRNA helicases
B5P37_02400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
AAA_19
AAA_30
SUa-2TM
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ARJ50245
UniProt:
A0AAC9RT44
LinkDB
All DBs
Position
complement(477548..479035)
Genome browser
AA seq
495 aa
AA seq
DB search
MQKFTDLGVSERTAETLEAMGFAEPTPIQKDSIPSALENKDILGQAQTGTGKTGAFGIPL
IEKVVGQEGVRALILAPTRELAMQVAEQLREFSRGQKVQVVTVFGGMPIDRQIKSLKRGP
QIVVGTPGRVIDHLNRRTLKTHDIETLILDEADEMMNMGFIDDMRYIMDKLPSENRQTML
FSATMPKAIQELVQKFMKSPRIIKTMNNEISDPQIDEYYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKHGIAVTFVNPIEMDYIRQIEQTNR
RQMRALRPPHRKEVLKAREEDIKSKVQNWMDAAKEPRVENIAKQLLETYDETELVTALLQ
ELVESNDEVEVQLTFEKPLSRKTSRSPKGNRKGGGNKRHSKPARNHKPTGNKKGNFKHKR
ETKVKKGRTFADHQK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttacagatttaggcgtttcagaacgtacagctgaaaccctagaggcaatg
ggatttgcggaaccgacaccgattcaaaaagacagtatcccatcagcactcgaaaataaa
gatatacttggtcaagcgcagaccggcacaggaaaaacaggtgcattcggcattccattg
attgaaaaagtcgttggacaagaaggcgtacgtgcgttaattttagcacctacacgtgaa
ttagcgatgcaggtcgctgaacaattgagagaatttagtcgtggtcaaaaagtacaagtg
gtgacagtatttggtgggatgcctatcgatcgtcaaatcaaatcattaaaacgcggtccc
caaattgtcgtaggtacaccgggacgtgtgattgatcaccttaatcgccgaacattaaaa
acacatgacatcgaaacgcttattttagatgaagcggatgaaatgatgaacatgggcttt
attgatgatatgcgttatattatggacaaactcccatctgaaaatcgtcaaacgatgctg
ttttcagcaacgatgccgaaagcgattcaagaattagtacaaaaatttatgaagtcgcct
agaattattaaaacgatgaataatgaaatttcagatcctcaaattgacgaatattatacg
attgtcaaagaacttgagaaatttgatacatttacaaacttcttagatgtacatcaacca
gaattagccattgtctttggacgaacaaaacgtcgtgtcgacgagttgacaagtgcacta
ttgtcaaaaggatataaggcagaaggtctacatggtgatattacacaagcaaaacgttta
gaagtattgaaaaaatttaaaaatgatcaaatcgacattttagttgcgactgatgttgca
gcgcgtggtctggatatttctggtgtgagccacgtttataactttgatatcccacaagat
acggaaagttatacgcaccgtattggtcgtacaggtcgtgcaggtaaacatggtatcgca
gtgacatttgtgaatccaatagagatggattacattcgtcaaatcgaacaaaccaaccgt
cgtcaaatgcgtgcattaagaccaccgcatcgtaaagaagtattaaaagcgcgtgaagag
gatattaagagtaaagtacaaaactggatggatgccgctaaagagccacgcgttgaaaac
attgctaaacaacttttagaaacttatgatgagacagaacttgtgacagcgttattacaa
gagttggtagaatcaaatgacgaagtggaagtacaattaacatttgaaaaaccgttatca
cgcaaaacaagtcgttctccaaaaggaaaccgtaaaggtggcggcaataagcgtcattca
aaaccggcacgtaatcataagcctactgggaacaaaaaaggaaacttcaaacataaaaga
gaaacgaaagtgaaaaagggccgtacttttgcggatcatcaaaagtaa
DBGET
integrated database retrieval system
