Staphylococcus lutrae: B5P37_07995
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Entry
B5P37_07995 CDS
T04991
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
slz
Staphylococcus lutrae
Pathway
slz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5P37_07995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slz03019
]
B5P37_07995
03400 DNA repair and recombination proteins [BR:
slz03400
]
B5P37_07995
Enzymes [BR:
slz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B5P37_07995
Messenger RNA biogenesis [BR:
slz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B5P37_07995
DNA repair and recombination proteins [BR:
slz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B5P37_07995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RQC
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
RloB
Motif
Other DBs
NCBI-ProteinID:
ARJ51253
UniProt:
A0AAC9RRX2
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All DBs
Position
1732389..1734170
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AA seq
593 aa
AA seq
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MEQTLSHYFGYQTFRPGQREIIECVLDRHHTLGVLPTGGGKSICYQVPGLMLQGTTLVIS
PLISLMKDQVDQLKTMGIAAAYLNSSLSHSEQKEIEAQLVNGELKFLYIAPERLEQPYFE
MLLRRVKISLVAFDEAHCISKWGHDFRPSYQAVIQRVLSMPQSFAIVALTATATAEVQQD
IMDRLMIQRQHLIKTSIRRRNLKFQVNRTYQRQKFVLDYIQKYSGMAGIVYCSTRKQVEA
LYDALDEAGVSATYYHAGMPAKQRDAAQNDFLYDRIRVVVATNAFGMGIDKSNVRYVIHY
NMPGDLESYYQEAGRAGRDGLESDCILLYSDRDVELHQYFISTSKADDDYKERMGEKLTK
MIQYTKTNKCLEATLVYYFEPNEKLEECQQCSNCINKNKTYNMTKEAKMIISAVARLRQQ
EGYAIVIQVLRGEESDYIYHQGYQNLSTYGIMRNYTTGELHHLIDELRFKGFLNEYNEVL
VCDASVEKLLMEEVQVYTTPFIRKSKETVHINTVEGVDRVLFEKLVEVRRALSERLSTPP
TNIFTDYTLEDFAKRKPMTKQEMIQIDGVGSYKLKHYCPEFLEVIQDYKMHRS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacattgtcgcattattttggataccaaacttttcgtccaggtcagagagaa
attattgaatgtgttttggatcgtcatcacactttaggggttttgcctacaggtgggggg
aaatccatatgctaccaagtaccaggattaatgttgcaagggacgacattggtcatcagt
ccgcttatttcgttaatgaaagaccaagttgatcaattgaaaacaatgggcatcgccgca
gcctatttgaatagtagtttgagtcattcagagcaaaaagaaatagaagcacaattagtg
aacggtgaattaaagtttttatacatcgcaccagaacgtctggagcaaccctattttgaa
atgttattacggcgagtgaaaatctcattagttgcatttgacgaggcacattgtatttct
aaatgggggcatgattttcgcccgagttatcaagctgtcattcaacgggtgttgtcaatg
ccacagtcgtttgcgattgtcgcattaacggctacagcgactgctgaagtgcaacaagat
attatggatcgattgatgatacaacggcaacatttaattaagacaagcattcgacgacgt
aacttaaaatttcaagtgaatcgtacgtatcagcgtcaaaagtttgtgttggattatatt
cagaaatatagtggaatggctggtattgtgtattgctcgacacgaaagcaagttgaagcg
ttatacgacgcattagatgaagcgggagtttcggcgacatattatcatgcgggaatgcca
gcaaaacaaagagatgcagcacaaaatgactttctatatgaccgtattcgagttgttgtt
gcaacaaatgcgtttggtatgggaattgataagtcaaacgtacgctatgtaattcattat
aatatgccaggcgatttggagtcgtattatcaagaagcgggacgtgcaggacgcgatggt
ttagaaagcgattgtattttattatacagtgatagagatgtggaattgcatcaatatttt
attagtacgtctaaagcggatgatgactacaaggaacgtatgggtgaaaaattaacgaaa
atgattcaatacacgaagaccaataaatgtctagaagcgacattggtttattattttgaa
ccgaatgaaaaactggaagagtgccaacaatgcagtaattgtattaacaaaaacaaaaca
tataatatgacaaaagaagctaaaatgattatcagcgctgtagcacggttgcgacaacaa
gaaggctatgccatcgtcatccaagtattacgaggagaagagtcagattatatttatcat
caaggctatcaaaacctttcaacatacgggattatgagaaattacacgacaggcgagctc
catcatttaattgacgagctccgatttaaaggatttttaaatgagtataatgaagtattg
gtctgtgatgcttcagtggaaaaactattgatggaagaagtccaagtttatacaacacct
ttcatacgcaaatctaaagaaaccgtgcatatcaacaccgtagagggtgtggatcgcgta
ctatttgagaaactggtagaggttcgtcgagcattgagtgaacgattgagcacaccgcct
acgaacattttcacagattatactttagaggattttgcaaaaagaaaacccatgacaaaa
caagaaatgattcaaatcgatggtgtaggaagttacaagttaaaacattactgtcctgaa
tttcttgaggtcattcaagattataaaatgcaccgttcataa
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