Staphylococcus lutrae: B5P37_08180
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Entry
B5P37_08180 CDS
T04991
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
slz
Staphylococcus lutrae
Pathway
slz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B5P37_08180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slz03400
]
B5P37_08180
DNA repair and recombination proteins [BR:
slz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B5P37_08180
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B5P37_08180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
BCA_ABC_TP_C
AAA_21
nSTAND1
RsgA_GTPase
AAA_23
AAA_29
AAA_16
AAA_33
DnaJ_CXXCXGXG
nSTAND3
ATPase_2
Viral_helicase1
cobW
YwpF
Motif
Other DBs
NCBI-ProteinID:
ARJ51288
UniProt:
A0AAC9WJP1
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All DBs
Position
1773485..1776328
Genome browser
AA seq
947 aa
AA seq
DB search
MKEPSIIVKGARAHNLKNIDIELPKHQLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYLRLLYARIGKP
YCPDHGIEIESQTVQQMVDRIMELEERTKIQLLAPVVNHRKGTHEKLLADIGKKGYVRVR
VDGEVMDVTQVTELDKNKNHTIEIVVDRVVVKPGIETRLADSIETVLALSEGRLVVDLID
GGTLEFSEKHACPICGFSIGELEPRMFSFNSPFGACSTCDGLGQKLTVDLDLVVPDKDKT
LNEGAILPWEPTSSDFYPTLLKRVCDVYKINMDKPFKKLTERQKHIILYGSGDKEITFNF
TSKNGQQRSRTMPFEGVVPNIERRYRESPSEYVREMMQKYMAEQVCETCHGQRLSREALS
VYVAGKNIGEVVEQSIKEALEYYENIVLSDQDAQIANMILKEIISRLTFLNNVGLDYLTL
NRASGTLSGGEAQRIRLATQIGSRLSGVLYVLDEPSIGLHQRDNDRLIHTLQEMRDLGNT
LIVVEHDEDTMVAADYLVDIGPGAGEHGGEVIASGTPEEVMQNPHSLTGQYLSGQKYIPV
PEQRRPITERKISIKGARSNNLKNIDVDFPLSVMNVVTGVSGSGKSSLVNEVLYKSLAKV
INKSKVKPGAHDDITGIEEIDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFASTNESK
VRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCHGQRYNRETLEVTYKG
KNIADVLEMTVEDAAQFFGNIPKIKRKLQTLVDVGLGYITLGQPATTLSGGEAQRVKLAS
ELHKRSTGRSIYILDEPTTGLHVDDISRLLKVLNRIVDNGDSVVIIEHNLDVIKTADHLI
DLGPEGGDGGGTILATGTPEEIAAIPESYTGRYLKTVLARDKERMED
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaccgtcaattatagtgaaaggggcacgtgcccataatttaaaaaatatagat
atcgagttacccaaacatcaattaattgtcatgacagggctctctggatcggggaaatct
tcgctcgcttttgatacgatttatgcggaaggtcagcgacgttatgttgaatcgttgagt
gcgtatgcccgtcagtttttaggacaaatggataaaccagatgtcgatacaattgaaggg
ttatctccagcgatttctattgatcaaaagacgacgagtaaaaatccacgttccactgtg
gcaacagtgacggaaatatatgattatcttcgtttgttatatgcgcgtatcgggaaacct
tattgtccggatcacggtatagaaattgaatcacaaaccgttcaacaaatggtggatcgc
attatggaactggaagaacgtacaaaaatacaattgttagcgccggttgtgaatcatcgt
aaagggacacatgaaaaactgttggcagatattggtaagaaaggttacgtacgtgttcgg
gtagatggcgaagtgatggatgtgacgcaagtgactgaacttgataaaaataaaaaccat
accattgaaatcgttgtcgaccgtgtcgtcgtcaagcctggtattgaaacacggttagcc
gattctattgaaacggtattagcgctgtcagaagggcgtcttgttgttgatttgattgac
gggggcacattagaattttcagaaaaacatgcgtgtccgatttgtggtttttcaattgga
gaacttgaacctcgaatgtttagtttcaatagtccatttggggcttgttcgacatgtgat
ggtttaggacaaaaattaacagtcgatttagatttagtcgtaccagataaagataaaaca
ttgaatgaaggtgccatactgccgtgggaaccgacaagttcagacttttacccgacactg
ttaaaacgtgtgtgtgatgtatataaaatcaatatggataaaccgtttaaaaaattgaca
gagcgtcaaaagcatatcatcttgtacggttcaggagataaggaaatcacgttcaatttc
acatccaaaaacggacaacagcgaagccggacaatgccttttgaaggtgtcgtccctaac
attgaaagacgttatcgcgaatcaccttctgaatatgtgcgtgaaatgatgcaaaaatat
atggcggaacaagtatgtgaaacatgtcatggtcagcgattgagccgcgaagcattatcg
gtatatgtggcaggtaaaaatatcggtgaagtggtggaacaatccattaaagaagcgctt
gagtattacgaaaacatcgtcctttctgatcaagatgcacaaattgcgaatatgatttta
aaggaaatcatttcacgactcacttttttaaataatgtaggattagattatttaactttg
aatcgcgcttcggggacgttatcaggaggggaagcacagcgtattcgactcgcaacacaa
attggttctcgattatcaggtgtgttatatgtcttggatgaaccgtctattggtctacat
caacgtgataatgaccgtctcattcatacccttcaagaaatgcgcgatttagggaatacg
ttaatcgtggttgaacatgatgaagataccatggttgctgcggactatcttgtcgatatt
ggaccgggtgcgggtgaacatggtggagaagtcatcgcgagtgggacaccagaagaagtg
atgcaaaatccacactctttaacaggtcaatatttaagcggtcaaaagtatattccagtg
cctgagcaacgtcgccctatcacagaacgaaaaatctctatcaaaggggcacggagtaac
aatttgaaaaacattgatgtggatttcccattatctgtgatgaatgttgtaacgggggta
tcaggctccgggaaaagttcgctcgtcaacgaagtattatataaatcattagcgaaagtg
attaataaatccaaagtaaaaccaggtgcacacgatgacatcacagggattgaagaaatt
gataaaatcattgacattgatcaatctcctatcggtcgaacaccacgttctaatccagcg
acatatacaggcgttttcgatgatattcgagacgtttttgcatctacaaacgaatctaaa
gtccgagggtatcaaaaaggtcgttttagttttaatgtgaaaggtggacgttgtgaagcg
tgtaagggagatggtattataaaaatagaaatgcattttcttccagatgtatatgttcct
tgtgaagtgtgtcatggtcagcgatacaatcgtgaaacattagaagtgacttataaaggt
aaaaatattgcagatgtattagaaatgacggtcgaagatgcagctcaattttttggaaac
attcctaaaatcaagcgcaaactacaaactttagtagatgtcggattgggttatattacg
ctgggccaacctgccacgacactttcaggtggagaggcacaacgggtaaaactggcttct
gaattgcataaacgttcaacagggcgatcgatatatattctcgatgaaccgaccactggt
ttgcatgttgacgatattagcaggttactcaaagtattgaatcgaattgttgataatggc
gattctgtcgttatcattgaacacaatcttgatgttatcaaaactgcagatcacttaatt
gacttaggtccggaaggtggagacggtggaggtacgattcttgcaacgggaacaccggaa
gagattgctgcaataccagaatcatatacaggacgttatctcaaaactgtgttagcgcgt
gataaggaacgaatggaggactag
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