KEGG   Staphylococcus lutrae: B5P37_10400
Entry
B5P37_10400       CDS       T04991                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
slz  Staphylococcus lutrae
Brite
KEGG Orthology (KO) [BR:slz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slz03032]
    B5P37_10400
   03400 DNA repair and recombination proteins [BR:slz03400]
    B5P37_10400
Enzymes [BR:slz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     B5P37_10400
DNA replication proteins [BR:slz03032]
 Prokaryotic type
  DNA Topoisomerases
   B5P37_10400
DNA repair and recombination proteins [BR:slz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      B5P37_10400
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_Top1 Toprim Toprim_4 Toprim_2 DUF2996 Cys_rich_CPXG Stap_Strp_tox_C
Other DBs
NCBI-ProteinID: ARJ51693
UniProt: A0AAC9WK17
LinkDB
Position
2233439..2235508
AA seq 689 aa
MADNLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDVEHDYEPKYITIRGK
GPVVKDLKRYAKKAKKVFLASDPDREGEAIAWHLANILELEDSKENRVVFNEITKDAVKE
SFKHPRGIEMNLVDAQQARRVLDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDREN
EIRNFKPEEYWSIEGEFRHGKSKFNAKFLHYKDKPFKLTTQEDVAVITKALDGNQFTVTN
VTKKEKTRKPSQPFTTSTLQQEAARKLNFKARKTMMVAQQLYEGIDLKRKGTIGLITYMR
TDSTRISKDAQNEAKQYIEKTYGEAYLSKTVQKGKQGDQDAHEAIRPTSTLRTPSEMKDF
LTRDQYRLYKLIWERFVASQMAPAILDTVAVDLTQNDVKFRANGQTVKFKGFMTLYVETT
DDKAKEKENRLPKLEVGNEVLATKIDPAQHFTQPPPRYTEARLVKTLEELKIGRPSTYAP
TIDTIQKRNYVKNENKRFVPTELGEIVHEQVKEYFPEIIDVDFTVNMETLLDKIADGDIA
WKKVVGDFFNSFKQDVERAEEEMEKVEIKDEPAGEDCEVCGHPMVIKMGRYGKFMACSNF
PDCRNTKAITKPIGVTCPKCKKGDVVERKSKKNRVFYGCSNYPECDFVAWDKPVGRDCPK
CQHALAEHKKGRTTQVVCTNCDYKEAEQK
NT seq 2070 nt   +upstreamnt  +downstreamnt
ttggcagataatcttgtcattgttgaatcgcctgcaaaagcgaaaactatagaaaaatat
ttaggtaagaaatataaagtcatcgcatcaatgggacatgtaagggatcttcctcgcagt
caaatgggtgtggatgtggagcacgactatgaacctaagtatattactatccgtggtaag
gggcctgttgtcaaagatttaaagagatatgcgaaaaaggcaaaaaaagtttttctcgca
agtgaccccgatcgtgaaggtgaagcaattgcatggcacttggcaaatattttagagctt
gaagatagtaaagaaaatcgcgttgtctttaacgaaattacgaaagacgcagttaaagaa
agttttaaacatccgcgtggaatagaaatgaatcttgtcgatgcgcaacaggcacgacgt
gtgctagaccgattagtaggttacaacatttcacctgtgttatggaaaaaagttaaaaaa
gggctatcagccggacgtgtgcaatctgttgcattacgtttagtgattgatcgtgaaaac
gaaatacgaaatttcaaaccagaagagtactggtcaattgaaggtgagtttcgtcacggc
aaatcaaaatttaatgctaagtttcttcattataaagacaagccgtttaagctaacgaca
caagaggatgttgctgtgattactaaagcgttagacggcaatcaatttacggttaccaat
gtgacgaaaaaagaaaagacacgtaagccttcacaaccttttacaacatcaacgctacaa
caagaagcagcgcggaaattaaatttcaaggcgcgtaaaacgatgatggtcgcacaacag
ttgtatgaaggtattgacttaaaacgtaaaggcacaattggtcttatcacatatatgaga
acagactctacacgtatttctaaagatgcacaaaacgaggccaaacaatatatcgaaaag
acgtatggcgaagcctatttatctaaaaccgtacaaaaaggaaaacaaggcgatcaagat
gcacatgaagccatccgtccaacaagcactttaagaacaccgtcagaaatgaaagacttc
ttgacacgtgatcaataccgtttgtataaattgatttgggaaagatttgttgccagtcaa
atggcccctgcaattttggataccgtcgcagttgatttgacacaaaatgacgtaaaattc
agagccaatggtcaaacggtgaaatttaaagggttcatgacgttatatgttgaaaccact
gatgataaagcaaaagaaaaagaaaatcgtttgccaaaactcgaagtaggaaatgaagtg
cttgcaacaaaaattgatccagcacaacactttactcaaccgccaccacgctatacagaa
gcgcgattggttaaaacattggaagaacttaaaatcggtcgaccttcaacttatgcaccg
acgattgataccattcaaaagcgtaattatgtcaaaaatgaaaataaacggtttgtgcca
actgaattaggtgaaattgttcatgaacaagttaaagaatattttccagaaatcattgat
gttgatttcacagtaaacatggaaacattacttgataaaattgctgatggtgacattgca
tggaaaaaagttgttggtgactttttcaatagcttcaagcaagatgttgaacgtgctgaa
gaagaaatggaaaaagtagagattaaagatgaaccggctggagaagattgtgaagtgtgt
ggacatcctatggtcattaaaatgggacgttacggtaaattcatggcttgttcaaatttt
ccggattgtcgcaatacgaaagcgattacgaagccgattggtgtcacgtgtccaaaatgt
aaaaaaggtgatgttgttgaacggaaatctaagaaaaaccgcgttttttacggttgttct
aattatcccgaatgtgattttgtagcttgggataaacctgttggtcgagattgtccgaaa
tgtcaacatgcattggcagaacataaaaaaggacgaacaacacaagtcgtttgtacaaat
tgtgactataaagaagcagaacaaaaataa

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