Streptomyces avermitilis: SAVERM_1212
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Entry
SAVERM_1212 CDS
T00126
Symbol
phrB
Name
(GenBank) putative deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sma
Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sma03400
]
SAVERM_1212 (phrB)
Enzymes [BR:
sma01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SAVERM_1212 (phrB)
DNA repair and recombination proteins [BR:
sma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SAVERM_1212 (phrB)
Prokaryotic type
SAVERM_1212 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAC68922
UniProt:
Q82NS9
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All DBs
Position
1503492..1504865
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AA seq
457 aa
AA seq
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MNVSVVLFTSDLRLHDHPPLRAALDGARQVVPLFVRDRAVDGAGFAAPNRLAFLADCLRD
LDAGLRERGGRLVLRSGDVVDQVCKVAAEADADEVHLAAGVSAYAHRREQRLRSALEADG
RRLHVHETVITAVAPGAVTPSSSDHFAVFTPYFRHWEREHLRDALGAPRGVRVPESVGSE
RLPTRTELSGLSQGLAAGGEEEGRKRLMAWLRGGITAYEDRHDDLAGDATSHLSPHLHFG
TLSPVELVHRARRTGGPGAEAFVRQLAWRDFHYQVLAARPDAATADYRGRGDRWRSEAAA
REEVEAWRTGRTGYPVIDAAMRQLRHEGWMHNRGRLLTASFLTKTLYVDWRVGARHFLEL
LVDGDVANNQLNWQWMAGTGTDTRPNRVLNPVTQAKRYDPDGAYVRRWVPELEGLRGAAV
HEPWKLKGLDRAAYDYPDPIVELADGLARFRHARGRD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtctcggtcgtcctgttcacctccgacctgcgtctgcacgaccatccgccgctg
cgggcggccctggacggcgcgcgtcaggtggtgcccctgttcgtgcgcgaccgggccgtc
gacggggccgggttcgccgcccccaaccggctggcgttcctcgccgactgtctgcgagac
ctcgacgccgggctgcgcgagcgcggcgggcgactggtgctccgctccggcgacgtggtc
gaccaggtgtgcaaggtggcggccgaggcggacgccgacgaggtgcatctggcggccggg
gtcagcgcgtacgcccaccggcgcgagcagcggctgcggtcggccctggaggcggacggg
cgtcgactgcacgtccacgagacggtgatcaccgcggtggcgccgggtgccgtcaccccg
tcctcctcggaccacttcgccgtcttcaccccgtacttccggcactgggagcgggagcat
ctgcgcgacgcgctcggcgcgccgcgcggcgtgcgggtgccggagagcgtgggctcggaa
cggcttcccacccgcacggaactgtccggactgtcgcaggggctggcggcgggcggcgag
gaggagggcaggaagcggctcatggcctggctgcgcggcggcatcacggcgtacgaggac
cgccatgacgacctggccggcgacgccacttcccacctctccccccacctgcacttcggc
acgctgtcccccgtcgaactcgtccaccgggcgcggcggacgggcggccccggcgccgag
gccttcgtacggcagctcgcgtggcgcgacttccactaccaggtgctggccgcacggccc
gacgcggccaccgcggactaccgcggccgcggcgaccgatggcggtccgaggccgcggcg
cgggaggaggtcgaggcgtggcggacgggccgcaccggctacccggtgatcgacgcggcg
atgcgccaactgcggcacgagggctggatgcacaatcgtggccgtctgctgaccgcgagc
ttcctcaccaagacgctgtacgtggactggcgggtcggcgcccgccacttccttgagctg
ctggtggacggcgatgtcgccaacaaccagctcaactggcagtggatggccggaaccggc
accgacacccggcccaaccgtgtcctcaatccggtcacccaggccaagcggtacgacccg
gacggcgcgtacgtccggcgctgggtgccggaactcgaaggactccggggagcggccgtg
cacgagccctggaagctcaagggactcgaccgcgccgcgtacgactaccccgacccgatc
gtcgaactcgccgacggtctggcccgcttccggcacgcccgcggacgcgactga
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