Streptomyces avermitilis: SAVERM_1873
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Entry
SAVERM_1873 CDS
T00126
Symbol
sig19
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sma
Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sma03021
]
SAVERM_1873 (sig19)
Transcription machinery [BR:
sma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAVERM_1873 (sig19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_24
DUF7343
HTH_23
GerE
MarR
MarR_2
HTH_Tnp_ISL3
HTH_28
HTH_3
Phage_antitermQ
DUF7342
KORA
UPF0122
HTH_15
DUF4423
HTH_1
Motif
Other DBs
NCBI-ProteinID:
BAC69584
UniProt:
Q82LY7
LinkDB
All DBs
Position
complement(2300101..2300895)
Genome browser
AA seq
264 aa
AA seq
DB search
MRTQASAKRHSHDDAPDTAEAFRKLATLPPGQQRDTLREEIVEAWLPMAERLAGRFRNRG
ENYEDLRQVASLGLVKAVDRYDPELGNAFESYAVPTITGEIKRHFRDHMWTLHVPRRVQD
LRNRVRFASQDLSQTISGRRPTVAEIAEHANMSEEDVRAGLEALESFTALSLDAELPGSE
DGYSLSDALGSADPALDIVVDREAVKPRLQALPERERDILYMRFFGDMTQSRIAEQLGIS
QMHVSRIISRCCDRLREQVMRDAA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacccaagccagcgcgaagcgccactcgcacgacgatgcacccgacaccgcagag
gccttccgcaagctcgccacgctcccgccgggccagcagcgcgacacactccgtgaggag
atcgtcgaggcctggctgcccatggccgaacggctcgccggacgctttcggaaccgcggc
gagaactacgaagacctgcgccaggtcgcgtcgctcggcctggtcaaggccgtcgaccgg
tacgaccccgagctcggcaacgccttcgagagctacgccgtgcccacgatcaccggcgag
atcaagcgccacttccgcgaccacatgtggaccctgcacgtgccgcgccgcgtccaggat
ctgcgcaaccgtgtgcggttcgccagtcaggacctctcgcagaccatctcgggccgcagg
cccaccgtcgccgagatcgccgagcacgccaacatgagcgaggaggacgtccgggcgggc
ctggaggccctggagagcttcacggcgctctccctcgacgccgaactgcccggcagcgag
gacgggtactcgctcagcgacgccctcggctcggccgacccggccctggacatcgtcgtc
gaccgcgaggccgtcaagccgcgcctccaggcgctgcccgagcgcgaacgggacatcctc
tacatgaggttcttcggtgacatgacgcagagccgcatcgccgagcagctcggcatctcc
cagatgcatgtgtcacggatcatcagccgctgctgcgaccgactgcgcgagcaggtgatg
cgggacgccgcctga
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integrated database retrieval system
