Streptomyces avermitilis: SAVERM_2085
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Entry
SAVERM_2085 CDS
T00126
Symbol
alkA2
Name
(GenBank) putative ADA-like regulatory protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sma
Streptomyces avermitilis
Pathway
sma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAVERM_2085 (alkA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sma03000
]
SAVERM_2085 (alkA2)
03400 DNA repair and recombination proteins [BR:
sma03400
]
SAVERM_2085 (alkA2)
Enzymes [BR:
sma01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SAVERM_2085 (alkA2)
Transcription factors [BR:
sma03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SAVERM_2085 (alkA2)
DNA repair and recombination proteins [BR:
sma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAVERM_2085 (alkA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
BAC69796
UniProt:
Q82LC5
LinkDB
All DBs
Position
complement(2538571..2539989)
Genome browser
AA seq
472 aa
AA seq
DB search
MIDEETRYEAVRSRDARFDGEFFFAVETTGIYCRPSCPAVTPKRQNVRYYATAAAAQSSG
FRACRRCRPDAVPGSAAWNVRADVVGRAMRMIGDGVVDREGVGGLAVRLGYSARQVQRQL
TAEVGAGPVALARAQRAHTARVLLQTTGLSITEIAFAAGFASVRQFNDTIRAVYAATPSE
LRAAAPRGGPPARRGAAPSAGIPLRLAHRGPYQAIAVFDLLARETVPGIEEMNGPRGRRT
YRRTLRLPYGTGIVAVDERPGAPAPRTPAHHGGWLDARLRLTDPRDLTTAVQRLRRLFDL
DADPYAVDERLGQDPRLGPLVAARPGLRSPGTADPDELAVRALVGTAEAERLVRRYGKTL
DAPSGSLTHVFPEPAVLAQAEPAGTLGALTAALADGTLRLDAGADRDDARQTLLALPGMD
DDTAAVIRTRALGDPDVAPPGAEVPDTWRPWRSYALQHLRVAAESAAYEPAT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgaagagaccaggtacgaggcggtgcgcagtcgcgatgcgcgcttcgacggg
gagttcttcttcgccgtcgagacgaccggcatctactgccgccccagctgcccggcggtg
acgccgaagcggcagaacgtgcggtactacgccacggcggccgcggcgcagagctcgggt
ttccgggcctgccgccgctgccgcccggacgccgtgcccggctcggccgcgtggaacgta
cgggccgatgtcgtcggccgcgccatgcgcatgatcggggacggtgtcgtcgaccgagag
ggcgtcggcggcctcgccgtccggctcgggtacagcgcccgccaggtgcagcggcaactc
accgccgaggtcggcgccggacccgtcgccctcgcccgcgcccagcgcgcccacaccgcg
cgcgtcctgttgcagaccaccggcctgtccatcaccgagatcgcgttcgcggccgggttc
gccagcgtgcggcagttcaacgacaccatcagggcggtgtacgcggccacgcccagtgag
ctgcgcgccgccgcgccccggggcggaccgcccgcccgccgcggcgccgccccctccgcc
gggatcccgctccggctcgcccaccggggcccgtaccaggccatcgccgtcttcgacctc
ctcgcccgcgagaccgtgccgggcatcgaggagatgaacggtccgcgcggccggcgcacc
taccgccggaccctccgccttccgtacggcaccggaatcgtggccgtcgacgagcgcccc
ggcgctcccgcgccccgtaccccggcccaccacggcggctggctcgacgcccgcctgcgc
ctcaccgacccgcgcgacctcaccaccgccgttcagcggctgcggcgactgttcgacctc
gacgccgatccgtacgccgtcgacgaacgcctgggccaggacccccggctcggtccgctc
gtcgccgcccgtcccggcctgcgctcgccgggcacggccgacccggacgagctggccgta
cgcgcgctggtgggcacggcggaggccgagcggctggtacggcggtacgggaagacactc
gacgcccccagcggcagcctcacccacgtcttccccgaaccggccgtgctcgcacaggcc
gaaccggccggcacactcggtgccctgaccgccgccctcgccgacggcaccctccgcctc
gacgccggcgccgaccgcgacgacgcccggcaaaccctgctcgccctgccgggcatggac
gacgacacggccgccgtcatccgtacccgtgccctcggcgacccggacgtggcaccgccg
ggcgccgaagtccccgacacctggcgcccctggcgctcgtacgcactccaacacctgagg
gtggccgccgagtcggcagcgtacgagccggccacgtag
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