KEGG   Streptomyces avermitilis: SAVERM_2500
Entry
SAVERM_2500       CDS       T00126                                 
Symbol
lhr
Name
(GenBank) putative ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sma  Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:sma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sma03400]
    SAVERM_2500 (lhr)
Enzymes [BR:sma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SAVERM_2500 (lhr)
    5.6.2.6  RNA 3'-5' helicase
     SAVERM_2500 (lhr)
DNA repair and recombination proteins [BR:sma03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SAVERM_2500 (lhr)
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr DEAD WH4_Lhr WH2_Lhr Helicase_C ResIII DUF6406 PhoH
Other DBs
NCBI-ProteinID: BAC70211
UniProt: Q82KA3
LinkDB
Position
3047311..3052287
AA seq 1658 aa
MVSSTHRALDGFSPATRGWFTGAFPAPTAAQAGAWRAIGEGSDVLVVAPTGSGKTLAAFL
AALDQLASAPPPADPRKRCRVLYVSPLKALAVDVERNLRSPLTGIRQEAVRLGMPEPEVK
VGIRSGDTPPAERRALSTRPPDILITTPESLFLMLTSATRDALTGVETVILDEVHAVAGT
KRGAHLALSLERLDELLPKPARRIGLSATVRPVDEVARYLSPRRKVEIVQPKSGKEFDLS
VVVPVEDLGELGGSPVADGSEGAERPSIWPHVEERIADLVQAHRSTIVFANSRRLAERLC
NRLNEIAYERATGEPLDEHHAPAELMGGSGAAQGAPAVIARAHHGSVSKEQRALVEEDLK
AGRLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAVSTGVVFPKY
RGDLVQAAVVTERMRTGSIESLKVPANPLDVLAQQLVAMVALDTWQVDDLLTTVRRAAPF
ASLPESAFTAVLDMLAGRYPSDAFAELRPRVVWDRVAGTVTGRPGAQRLAVTSGGTIPDR
GLFGVFLAGADPKKGGGRVGELDEEMVYESRVGDVFTLGTSSWRIEDITRDRVLVSPAPG
VPGRLPFWKGDQLGRPLELGRALGAFLREVGALPKDDARLRLLAAGLDAWAADNVLSYLA
EQREACGHVPDDRTIVVERFRDELGDWRVVVHSPFGAQVHAPWALALGARLAERYGMDAQ
VMHADDGIVLRLPDADLMGLDLLDQEPLKAGAPLDTAGAEQAPIGAADVAFDKGEVNQIV
TDQVGGSALFASRFRECAARALLLPRRSPGKRTPLWQQRQRAAQLLQVASEFGSFPIVLE
AVRECLQDVFDVPGLTELMGDIESRKVRLVEVTTPEPSPFARSLLFGYVAQFLYEGDSPL
AERRAAALSLDSRLLAELLGQAELRELLDADVLTELERELQWLTEDRRVKDTEGVADRLR
LLGPLTDAELAERGAEPQWAQELAGARRAIKVRIAGTDHWAAIEDAGRLRDALGTALPVG
VPEAFTEPVKDPLGDLLARYARTHGPFTSTAAAARFGLGVAVTEGALQRLAAAGRVVQGE
FHPAGIGQEWCDATVLRRLRRRSLAALRHELEPVPPAALAQFLPQWQHVGGGHGLRGVDG
LVRAIEQLQGASVPASALEKLVLPSRVSNYTPAMLDELTAAGEVVWAGAGSLPGKDGWVS
LYMADAAPLLLPAPHPLEPTALHQSVLDALSGGYGLFFRQITDQVRATTHPDATDPQLAD
VIWDLAWTGRLTNDTLAPMRSLLGSGRTAGSTAHRAKRAVPRGRYGSLTATARPQSRTGP
PTVAGRWSLLPALEPDTTVRAHALARTLLDRHGVVTRGAVAAEGVEGGFSATYRVLSVFE
ESGQARRGYVVEGLGAAQFAMDGAVDRLRAAANARERDETLPGPDRSDGFAGGAPHRLDA
ARPFAPAAAPGSGDGFLDRFDPQFDSNLGAFADLSDTADAQPVSSHPGTQAAPGLPEVQP
GPGLPRAQAGPRSPYGQGLPPNRTRSAGASRAVVLAAADPANAYGAALSWPEPPTGAGHK
PGRKAGSLVVLVDGELALYMERGGKTLLAWPSDPDAKTTDDPRLLAAAEALAASARAGSL
GTVTVERVNGASALTSPFGTLLEGAGFIATPRGLRLRA
NT seq 4977 nt   +upstreamnt  +downstreamnt
atggtcagttccacacaccgagccctcgacggcttctcgcccgcgacccgcggctggttc
acgggggcgtttcccgcgcccaccgcggctcaggccggcgcgtggcgtgccatcggcgag
ggctcggacgtgctcgtggtcgccccgaccggctccggaaagacactggccgccttcctc
gccgcgctcgaccagctggcgtccgccccgccgcccgccgaccccaggaagcgctgccgg
gtgctgtacgtatcgcccctgaaggccctcgcggtcgacgtggagcgaaatcttcgcagc
ccgctgaccggcatcaggcaggaagctgtgcgcctgggcatgcccgagcccgaggtgaag
gtcggcatccgctcaggggacaccccgcccgccgagcgccgcgcgctgtccacccgcccg
ccggacatcctgatcacgaccccggagtcgctgttcctgatgctcacgtcggccacgcgg
gacgcgctgacgggcgtggagacggtgatcctggacgaggtgcacgcggtcgccggcacg
aagcgcggcgcgcatctcgcgctctccttggagcggctcgacgagctgctgcccaaaccg
gcccgccgcatcggcctctccgcgaccgtgcgcccggtcgacgaggtcgcccgctatctc
tcaccgcggcgcaaggtggagatcgtccagccgaagtccggcaaggagttcgacctctcc
gtcgtggtcccggtcgaggatctgggcgagctgggcggctccccggtcgccgacggcagc
gagggcgccgagcggccgtcgatctggccgcacgtggaggagcggatcgccgacctcgtc
caggcccaccgctcgacgatcgtgttcgccaactcccgccgcctcgcggagcgcctgtgt
aacaggctcaacgagatcgcctacgagcgggccaccggcgagcctttggacgagcaccac
gccccggccgaactgatgggcggctcgggcgcggcccagggggcgcccgcggtgatcgcc
cgtgcccaccacggctcggtctccaaagaacagcgcgcgctcgtcgaggaggatctcaag
gcgggccgcctgcccgcggtggtcgccacctccagcctggagctgggcatcgacatgggc
gcggtggacctcgtcgtccaggtcgagtcgccgccgtcggtggcttccggcctccagcgc
gtcggccgcgccggccaccaggtgggcgcggtctccaccggcgtcgtcttccccaagtac
cgcggcgacctcgtccaggccgccgtggtcacggagcggatgcgcaccggctccatcgag
tccctgaaggtgcccgccaaccccctcgacgtgctcgcgcagcagctcgtggccatggtg
gccctcgacacctggcaggtcgacgacctgctgaccacggtccgccgcgccgctcccttc
gcctcgctcccggagtcggccttcaccgccgtgctcgacatgctcgcgggccgctatccg
tccgacgccttcgcggagctgcgcccgcgcgtggtgtgggaccgcgtcgccggcacggtc
accggccgcccgggagcgcagcgcctcgccgtcacgtccgggggcacgatcccggaccgt
gggctcttcggggtcttcctcgccggcgcggaccccaagaagggcggtggccgggtcggc
gagctcgacgaggagatggtgtacgaatcccgggtcggggacgtgttcaccctcggcacc
agctcctggcgcatcgaggacatcacgcgcgaccgggtcctggtctcccccgcccccgga
gtcccgggccgtctgcccttctggaagggcgaccagctgggccgcccgctggaactgggc
cgcgcgctgggggcgttccttcgtgaggtcggcgcgctcccgaaggacgacgcccggctg
cggctgctggcagccggactcgacgcctgggccgccgacaacgtcctgtcgtacctggcc
gaacagcgcgaggcctgcggacacgtccccgacgaccgcacgatcgtcgtggagcgcttc
cgggacgagctcggcgactggcgggtcgtcgtgcactctcccttcggtgcccaggtccac
gccccgtgggccctcgcgctgggcgcccggctcgccgagcggtacggcatggacgcccag
gtcatgcacgccgacgacggcattgtgctgcggctgccggacgccgacctgatgggcctg
gacctgctcgaccaggagcccctgaaggccggcgcccctctggacacagcgggcgccgag
caggcgcccatcggtgccgcggacgtcgccttcgacaagggcgaggtcaaccagatcgtc
accgaccaggtcggcggctcggcgctgttcgcgtcccggttccgtgagtgcgccgcccgc
gcgctgttgctgccgcgccgcagccccggcaagcgcaccccgctgtggcagcagcgccag
cgtgcggcccaactgctccaggtggccagcgagttcggctcgttcccgatcgtcctggag
gcggtccgcgaatgcctccaggacgtcttcgacgttccgggcctcacggagctgatgggc
gacatcgagtcccgcaaggtccgcctggtcgaggtcaccacgccggagccgtcgcctttc
gcccgctccctcctcttcggatacgtcgcgcagttcctctacgagggcgactcacccctc
gccgagcggcgcgccgccgcgttgtcgctggactcgcggctgctggccgagctgctcggc
caggcggagttgcgcgagctgctcgacgccgatgtcctgacggagctggagcgcgagctc
cagtggctcaccgaggaccgtcgcgtcaaggacaccgagggcgtcgcggaccggttgcgg
ctgctgggccccttgaccgacgccgagctggccgagcgcggggccgagccgcagtgggcc
caggagctggccggggcccgccgcgccatcaaggtccgcatcgcgggcaccgaccactgg
gcggcgatcgaggacgcgggccgactgcgcgacgccctcggcacagcgctgcccgtcggc
gtccccgaggcattcacggagccggtcaaggacccgctcggcgacctcctcgcgcggtac
gcgcgcacgcacggcccgttcacctcaacggccgctgccgcgcgcttcggtctcggcgtg
gccgtcaccgagggcgcgttgcagcggctcgcggcggccggccgggtcgtccagggggag
ttccaccctgcgggcatcggccaggagtggtgcgacgcgaccgtgctgcgccggctgcgg
cgccgctccttggccgccctgcggcacgagctggagccggttccgcccgccgcgctcgcg
cagttcctgccgcagtggcagcacgtcggcggcggacatgggctgcggggcgtcgacggc
ctggtgcgcgcgatcgagcagctccagggcgcctccgtgccagcgtccgccctggagaag
ctcgtcctgccgtcacgcgtctcgaactacacgcccgcgatgctggacgaactcaccgcc
gccggtgaggtggtgtgggccggggccggttcactgcccggcaaggacggctgggtctcg
ctgtacatggcggacgcggcccccctgctcctgcccgccccgcaccccttggagccgacc
gcgctccaccagtcggtcctggacgccctgtccgggggttacggcctgttcttccggcag
atcaccgatcaggtccgggccaccacgcaccccgacgccaccgatccccaactggcggac
gtgatctgggacctggcctggacgggccggctcacgaacgacacgctcgcgccgatgcgt
tccctgctcggctcgggccgcaccgcgggctccaccgcgcaccgcgccaagcgtgccgtc
ccgcgcgggcggtacggctccctgacggccaccgcgcgcccccagtcccgtacgggcccg
ccgaccgtcgccggccgctggtcgctgctgcccgctctcgagcccgacaccaccgtgcgc
gcccacgctctggcccgcaccctgctggaccggcacggggtggtgacccgcggagccgtc
gcggcggaaggcgtcgagggcggcttctcggcgacgtaccgcgtcttgtccgtgttcgag
gagagcgggcaggcgcgccgcggctatgtggtcgaggggctgggcgcggcgcagttcgcg
atggacggcgcggtggaccgcctgcgcgcggcggcgaacgcgcgggagagggacgagaca
ctgcccggcccggaccgttcggacggcttcgccgggggcgccccccatcggctcgacgcg
gcccgtccgttcgcccctgcggcggctcccggttccggagatggtttcctcgacaggttc
gacccgcagttcgactccaacctgggcgccttcgccgacctctccgacactgccgacgcg
cagcccgtctccagccacccggggacgcaggcagcccccggcctccccgaggtgcagccg
ggtccaggccttccccgcgcgcaagccggcccccgctccccgtacggccagggtcttccc
ccgaaccgcactcgctccgccggcgcctcccgagccgtcgtcctggccgcggcggacccc
gcgaacgcctacggcgcggccctctcctggcccgaacccccgaccggggcgggacacaag
ccggggcgcaaggcgggttccctggtcgtactcgtcgacggcgagctggcgctctacatg
gagcgcggcggcaagacgctgctggcctggccctccgaccccgacgccaagacgacggac
gatccccgtctactggccgccgccgaggctctcgccgcgtccgcccgcgcgggttccctg
ggcacggtcaccgtggagcgggtcaacggcgcctcggcgctcacctccccgttcggcacc
ctcctggaaggagcaggcttcatcgcgacgccccgcggtctgcgccttcgcgcgtga

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