Streptomyces avermitilis: SAVERM_2600
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Entry
SAVERM_2600 CDS
T00126
Symbol
clpC1
Name
(GenBank) putative ATP-dependent Clp protease
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
sma
Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sma03110
]
SAVERM_2600 (clpC1)
Chaperones and folding catalysts [BR:
sma03110
]
Heat shock proteins
HSP100
SAVERM_2600 (clpC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
TniB
ATPase_2
UVR
bpMoxR
nSTAND3
IstB_IS21
AAA_18
TsaE
AAA_28
AAA_24
NACHT
DUF99
AAA_19
NBD_SMAX1
DNA_pol3_delta2
nSTAND1
DUF815
Motif
Other DBs
NCBI-ProteinID:
BAC70311
UniProt:
Q82K04
LinkDB
All DBs
Position
3194289..3196817
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AA seq
842 aa
AA seq
DB search
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVR
QQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA
AQVLVKLGADLNRVRQQVIQLLSGYHQGKESTVEGGPAEGTPSTSLVLDQFGRNLTQAAR
ESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLK
DKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAID
AASILKPMLARGELQTIGATTLDEYKKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLR
DRYEAHHRVSITDEALVQAATLADRYVSDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLRE
FDEKIAGVRHDKESAIDSQDFEKAASLRDKEKQLLAAKAKREKEWKTGDMDVVAEVDGEL
IAEVLAASTGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPK
RPGGSFIFAGPSGVGKTELSRALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVG
YEEGGQLTEKVRRKPFSVVLFDEVEKAHADIFNSLLQILEDGRLTDSQGRVVDFKNTVII
MTTNLGTRDISKGFNLGFAAQGDSKSTYERMKNKVADELKRHFRPEFLNRVDDVVVFPQL
TRDDILAIVDLMITKVDERLKDRDMGIELAQSAKELLAQKGYDPMLGARPLRRTIQREIE
DTLSEKILFGELRPGHIVVVDTEGEGETKTFTFRGEEKSALPDVPPIEQATGGDRPGSGT
ES
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagaggttcaccgaccgcgcgcggcgcgttgtcgtcctggctcaggaagaagcc
cggatgctcaaccacaactacatcggcaccgagcacatcctcctgggcctgatccacgag
ggtgagggtgtcgccgccaaggccctggagagcctcgggatttcgctcgaggcggtccgc
cagcaggtggaggagatcatcggccagggccagcaggccccgtccgggcacatccccttc
actccccgtgccaagaaggtcctggagctgtcgctccgcgaggcccttcagctgggccac
aactacatcggcacggagcacatcctgctcggcctgatccgtgagggcgagggtgtcgcc
gcccaggtcctggtcaagctgggcgcagacctcaaccgggtgcggcagcaggtcatccag
ctgctctccggttaccaccagggcaaggagagcaccgtcgagggcggtcctgccgagggc
accccctccacgtccctggtcctcgaccagttcggccggaatctcacccaggccgctcgt
gagtccaagctcgacccggtcatcgggcgcgagaaggagatcgagcgggtcatgcaggtg
ctgtcccgccgtacgaagaacaacccggtcctgatcggtgagcccggtgtcggcaagacc
gccgtcgtcgagggcctcgctcaggcgatcgtcaagggcgaggtgcccgagaccctcaag
gacaagcacctctacaccctggacctgggtgcgctggtcgccggttcccgctaccgcggt
gacttcgaggagcgcctgaagaaggtgctgaaggagatccgcacccgcggcgacatcatc
ctgttcatcgacgagctgcacacgctcgtcggtgcgggtgccgccgagggcgccatcgac
gcggcttcgatcctgaagccgatgctggcccgcggtgagctgcagaccatcggcgccacc
acactcgacgagtacaagaagtatctggagaaggacgcggctctcgagcggcgtttccag
ccgatccaggtggcggagccttccctcccccacacgatcgagatcctcaagggcctgcgg
gaccgttacgaggcacaccaccgtgtctccatcacggacgaggccctggtgcaggcggcg
acgctcgccgaccgctacgtctcggaccgcttcctcccggacaaggcgatcgacctgatc
gacgaggcgggttcccggatgcggatccgccggatgaccgcgccgccggacctgcgcgag
ttcgacgagaagatcgcgggcgtgcgccacgacaaggagtccgcgatcgactcgcaggac
ttcgagaaagccgcctcccttcgcgacaaggagaagcagctcctggccgcgaaggccaag
cgggagaaggagtggaagaccggcgacatggacgtcgtcgccgaggtcgacggcgagctg
atcgccgaagttctggccgcgtcgacgggcattcccgtcttcaagctcacagaagaggag
tcgagtcgtctcctgcgcatggaggacgagctccacaagcgggtcatcggccagaaggac
gccgtcaaggcgctgtcgaaggcgatccgtcgtacgcgtgcgggtctgaaggacccgaag
cgtccgggtggttcgttcatcttcgcgggcccgtccggtgtcggtaagaccgagctgtcg
agggccctggcggagttcctgttcggtgacgaggacgcgctgatctccctcgacatgtcg
gagttcagcgagaagcacacggtctcgcgtctgttcggttcgcctcccggttacgtgggc
tacgaagagggcgggcagctgaccgagaaggtccgccgcaagccgttctccgtggtcctg
ttcgacgaggtcgagaaggcccacgcggacatcttcaactcgctgctgcagatcctggag
gacggtcggctgaccgactcccagggccgggtcgtggacttcaagaacacggtcatcatc
atgacgaccaacctcggcacccgggacatctccaagggcttcaacctgggcttcgccgcc
cagggcgactccaagtccacctacgagcgcatgaagaacaaggtcgcggacgagctcaaa
cggcacttccgccccgagttcctcaaccgcgtcgacgacgtggtcgtcttcccgcaactg
acgcgggacgacatcctcgcgatcgtcgacctgatgatcaccaaggtcgacgagcgcctc
aaggaccgggacatgggcatcgaactcgcccagtccgcgaaggaactgctcgcgcagaag
ggctacgaccccatgctcggggcgcggccgctgcgccgcacgatccagcgcgagatcgag
gacaccctctccgagaagatcctcttcggggagctgcgtccgggccacatcgtggtcgtc
gacacggagggcgagggcgagaccaagaccttcaccttccgcggcgaggagaagtcggcc
ctgcccgacgtccccccgatcgaacaggcaacaggaggtgaccggccgggctcgggtacg
gagtcctga
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integrated database retrieval system
