Streptomyces avermitilis: SAVERM_2630
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Entry
SAVERM_2630 CDS
T00126
Symbol
whiG
Name
(GenBank) putative RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
sma
Streptomyces avermitilis
Pathway
sma02020
Two-component system
sma02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAVERM_2630 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SAVERM_2630 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sma03021
]
SAVERM_2630 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sma02035
]
SAVERM_2630 (whiG)
Transcription machinery [BR:
sma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAVERM_2630 (whiG)
Bacterial motility proteins [BR:
sma02035
]
Flagellar system
Flagellar assembly proteins
Stator
SAVERM_2630 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
UPF0122
Motif
Other DBs
NCBI-ProteinID:
BAC70341
UniProt:
Q82JX4
LinkDB
All DBs
Position
complement(3229155..3229997)
Genome browser
AA seq
280 aa
AA seq
DB search
MPQHTSGSDRAAIPPAARDGGSVRPPAPSTLDELWRSYKATGDERLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDIGREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARNVERAYATLEARLRRTPTEGEVATEMGIAVDELHSVFSQLSLANVVAL
EELLHVGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRFLARAINTLPDREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLASFGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgaccgggcggcgattcccccagccgcccgcgacggc
ggcagcgtgcgcccgcccgctccctcgacgctcgacgagctgtggcggtcgtacaaggcg
acgggggacgaacggctgcgggagcagctgatcctgcactactcaccgctggtgaagtac
gtggccggccgggtgagcgtcggtctgccgcccaatgtggagcaggcggatttcgtctcc
tccggggtgttcggactgatcgacgcgatcgagaagttcgacatcgggcgggagatcaag
ttcgagacgtacgcgatcacccggatccggggcgcgatgatcgatgaactgcgggcgctc
gactggatccctcgctcggtgcggcagaaggcgcggaacgtggagcgggcgtacgcgacg
ctggaggcgcggctgcggcggaccccgacggagggggaggtggccaccgagatgggcatc
gcggtggacgaactccactccgtgttcagccagttgtcgctggcgaacgtggtggccctg
gaggagctgctgcatgtcgggggcgagggcggcgaccggctgagcctgatggacacgctg
gaggacaccgccgccgacaacccggtggaggtggccgaggaccgggagctgcggcggttc
ctggcaagggcgatcaacacgctgcccgaccgggagaagaccgtggtcacgctctactac
tacgaagggctcacgctcgccgagatcggcaatgtgctgggggtgacggagagccgggtg
agccagatccacacgaagtccgtgctccagctcagggccaaactggcgagcttcggtcgc
tga
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integrated database retrieval system
