KEGG   Streptomyces avermitilis: SAVERM_2684
Entry
SAVERM_2684       CDS       T00126                                 
Symbol
hupB
Name
(GenBank) putative histone-like DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sma  Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:sma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sma03032]
    SAVERM_2684 (hupB)
   03036 Chromosome and associated proteins [BR:sma03036]
    SAVERM_2684 (hupB)
   03400 DNA repair and recombination proteins [BR:sma03400]
    SAVERM_2684 (hupB)
DNA replication proteins [BR:sma03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SAVERM_2684 (hupB)
Chromosome and associated proteins [BR:sma03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SAVERM_2684 (hupB)
DNA repair and recombination proteins [BR:sma03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SAVERM_2684 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HC2
Other DBs
NCBI-ProteinID: BAC70395
UniProt: Q82JS0
LinkDB
Position
complement(3289655..3290308)
AA seq 217 aa
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVGGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVSVKKAPKGSLTGAASATVKK
AAAKKTTAKKATAAAKKTTAKKTTAKKAAPAAKKTTATAKKTTAKKTTAGAKKAAAKKTT
AKKATAKKAPAKKATAKKAPAKKSTARKTTAKKATAR
NT seq 654 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgatcgcggacaaggtcggcggccgtcagcaggcc
gccgacgcggtcgacgccgtactggacgccatcgtccgcgcggtggtcggcggggaccgg
gtttcggtcaccggcttcggttccttcgagaaggtggaccgtccggcccgctacgcccgc
aacccgcagaccggggagcgcgttcgggtcaagaagacctccgtgccgcgcttccgcgcc
ggccagggcttcaaggacctggtgagcgggtcgaagaagctcccgcgcggtggtgaggtc
tcggtcaagaaggcgcccaagggcagcctgaccggcgccgcttcggccacggtcaagaag
gccgcggccaagaagaccaccgccaagaaggcgacggcggccgcgaagaagaccaccgcc
aagaagaccacggccaagaaggccgcgcccgccgccaagaagaccacggcgacggcgaag
aagacgaccgccaagaagaccacggcgggcgccaagaaggccgcggccaagaagaccacc
gccaagaaggcgacggccaagaaggccccggcgaagaaggcgacggccaagaaggccccc
gccaagaagtcgacagcgcgcaagaccaccgccaagaaggccaccgcccgctag

DBGET integrated database retrieval system