Streptomyces avermitilis: SAVERM_3013
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Entry
SAVERM_3013 CDS
T00126
Symbol
sig21
Name
(GenBank) putative RNA polymerase sigma factor, sigH
KO
K03090
RNA polymerase sigma-B factor
Organism
sma
Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sma03021
]
SAVERM_3013 (sig21)
Transcription machinery [BR:
sma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAVERM_3013 (sig21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
HTH_24
MarR_2
NirdL-like_HTH
Sigma70_ECF
MarR
IF2_N
HTH_3
HTH_Crp_2
HTH_AraC
GerE
Motif
Other DBs
NCBI-ProteinID:
BAC70724
UniProt:
Q82IW9
LinkDB
All DBs
Position
3768334..3769509
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AA seq
391 aa
AA seq
DB search
MRNGDGPVQDEERGTRELPTEDGGAPCSIGADSLGGGGPSGPRRTADGIDGIPEQARPHP
EDHSSAAAEGSQQQEPFGEGGRAARSVPVDGRRDPAGARGEALRTESGGASSKGRRVTGG
TMSEHERNAEPSVPSGTQHDPQDRSGARALFIELRMLPDGSPEYAELRNRLVRMHLPLVE
HLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPERGVEFSTYATPTVVGEIKRHFRDKGW
AVRVPRRLQELRLALTTATAELSQQHGRSPTVHELAEKLAISEEEVLEGLESANAYSTLS
LDVPDTDDESPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQ
IAQEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
gtgaggaacggggacgggccggtgcaggacgaagagcgcggcacacgggaacttcccacc
gaggacgggggtgccccctgctcgatcggagccgacagcctggggggcggcggccccagc
gggccgcggcgcacggcggacggcatcgacggcatccccgagcaggcccggccgcacccc
gaggaccactcctcggcggcggccgagggttctcagcagcaagagccgttcggcgagggc
gggcgcgcggcgcgctccgtcccggtcgacgggcgacgggatccagcgggtgcccgcggg
gaggctctgcggacggagtccggtggagcgtcctcgaaagggcggcgcgtgacgggcggg
acgatgagcgagcacgagcgaaacgctgagccgagtgtgccgagcggcacacagcacgac
ccccaggaccgcagcggggcgcgcgccctgttcatcgagctgcgcatgctgcccgacggc
agcccggagtacgcggagctgcgcaaccggctggtccgtatgcatctgccgctcgtggag
cacctcgcgcgccgcttccgcaaccgcggcgagccgctggacgacctcacccaggtcgcc
accatcggtctcatcaagtcggtcgaccgcttcgacccggagcgcggcgtcgagttctcg
acgtacgcgaccccgaccgtagtcggcgagatcaagcggcacttccgcgacaagggctgg
gcggtccgtgtgccgcgccgactccaggagctgcgcctcgccctgacgacggccacggcg
gagctgtcccagcagcacggccgctcgccgacggtgcacgagctggccgagaagctggcc
atctcggaggaggaggtcctggagggcctggagtccgcgaacgcgtactccacgctgtcc
ctggacgtccccgacacggacgacgagtccccggcggtcgcggacacgctgggcgcggag
gacgaggcgctggagggcgtcgagtaccgggagtcgctcaagccgctgctcgaggacctc
ccgccgcgggagaagcggatcctgctgctgcgtttcttcggcaacatgacgcagtcgcag
atcgcgcaggaggtcggcatctcacagatgcacgtctcgcgtctgctggcccgcaccctg
gcccagctgcgggagaagctgctcgtcgaggagtga
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