Streptomyces avermitilis: SAVERM_3072
Help
Entry
SAVERM_3072 CDS
T00126
Symbol
uvrD4
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sma
Streptomyces avermitilis
Pathway
sma03420
Nucleotide excision repair
sma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAVERM_3072 (uvrD4)
03430 Mismatch repair
SAVERM_3072 (uvrD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sma03400
]
SAVERM_3072 (uvrD4)
Enzymes [BR:
sma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAVERM_3072 (uvrD4)
DNA repair and recombination proteins [BR:
sma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAVERM_3072 (uvrD4)
MMR (mismatch excision repair)
Other MMR factors
SAVERM_3072 (uvrD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_12
C1_1
Zn_ribbon_TiaS
Zn_Ribbon_TF
DUF6011
Motif
Other DBs
NCBI-ProteinID:
BAC70783
UniProt:
Q82IR1
LinkDB
All DBs
Position
complement(3833208..3835520)
Genome browser
AA seq
770 aa
AA seq
DB search
MRLPPGRGGEPAALVRLQAPPCGQPPHPPPPTWQHGGVTAATHSTLFPQVPDSADAVLDG
LDPEQRAVATALHGPVCVLAGAGTGKTRAITHRIAYGVRAGILQPSSVLAVTFTNRAAGE
MRGRLRQLGASGVQARTFHSAALRQLQYFWPKAVGGGLPRIVDRKIQIVADAAAACRIRL
DRGELRDVTAEIEWSKVTQTVPADYAAAAAKAAREAPRDPAEIAQIYATYEDLKRDRAVI
DFEDVLLLTVGILQDRQDIAEAVRAQYQHFVVDEYQDVSPLQQRLLDLWLGERDSLCVVG
DASQTIYSFTGATPDHLLDFRTRHPGATVVKLVRDYRSSPQVVHLANGLLAQARGRAAEH
RLELISQREPGPEPVYTEYTDEPAEAEGAARRIRDLLASGVPAAEIAILFRTNSQSEIYE
QALADAGVPYQLRGAERFFDRPEVRKAGVALRGAARFGGNDTLLDDVVDLPSQVRAVLSG
EGWTSRPPAGSGAVRERWESLAALANLAQDFAAAKPDATLGDLVAELDERASAQHAPTVQ
GVTLASLHSSKGLEWDVVFLVGVAEGMMPITYAKTDEQIEEERRLLYVGVTRARQHLSVS
WALSRSPGGRPNRRPSRFLDGLRPGSVTTTGRGARAGAAGGIERGFAGSATSPAPRRTSR
IPARCRVCGRTLSDAGEMKLMRCEDCPSDMDEGLYERLREWRAVQAQRSGQPAFCVFTDK
TLMAIAEAVPDDEGDLARIPGVGVRKLNRYGADVLSICAGQEVEVGAEGD
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctgccgcccggacgcggcggcgagcctgccgcattagtacgactgcaggcgcct
ccctgtggacaaccgccgcacccgcctccgccgacctggcagcatggcggggtgacagca
gcaacgcactccaccctcttcccacaggttccggactctgccgacgcggtgctcgacggg
ctcgaccccgagcagcgcgcggtggcgaccgccctgcacgggccggtgtgcgtgctggca
ggtgccggcaccggcaagacacgcgccatcacccaccgcatcgcctacggggtgcgcgca
ggcatcctccagccctccagcgtgctcgccgtcaccttcaccaaccgcgccgccggcgag
atgcgcggccgactccgccagctcggcgcctccggtgtccaggcccgcacgttccactcc
gccgcgctgcgccagctccagtacttctggccgaaagcagtcggtggcggactccccaga
atcgtcgaccgcaagatccagatcgtcgcggacgcggcggccgcctgccgcatccgtctc
gaccggggcgagctgcgggacgtcaccgccgagatcgaatggtccaaggtcacccagacc
gtccccgccgactacgcggccgcggctgccaaggcagcccgcgaggccccccgggacccg
gccgagatcgcccagatctacgcaacgtacgaagacctcaagcgcgaccgcgccgtcatc
gacttcgaggacgtcctgctgctgaccgtgggcatcctccaggaccggcaggacatcgcg
gaggcggtccgcgcccagtaccagcacttcgtggtcgacgagtaccaggacgtcagcccc
ctccagcagcgcctcctggacctgtggctcggcgagcgcgacagcctgtgcgtcgtcggc
gacgccagccagacgatctactccttcaccggagcgacccccgaccacctgctcgacttc
cgcacccgccaccccggagccacggtcgtcaagctggtgcgcgactaccgctcctcgccc
caggtggtccacctcgccaacggcctgctcgcccaggcccgcggccgtgccgcggagcac
cgcctggagctgatctcccaaagagagcccggccccgaacccgtctacaccgaatacacc
gacgagccggccgaggccgaaggcgctgcccgccgcatccgcgacctcctggcctccggc
gtaccggcggccgagatcgccatcctgttccgcacgaactcccagtcggaaatctacgaa
caggccctcgccgacgccggagtgccctaccaactgcgcggcgccgagcggttcttcgac
cgccccgaggtgcgcaaggccggcgtcgccctgcgcggcgcggcccgcttcggcggcaac
gacacgctcctggacgacgtcgtcgacctgccctcccaggtgcgcgccgtgctctccgga
gagggctggaccagtcggcccccggccggctccggcgcggtccgggaacgctgggaatcg
ctggccgccctggcgaacctcgcccaggacttcgccgccgccaagcccgacgccaccctc
ggcgacctcgtggcggagctggacgagcgggcgagcgcccagcacgcaccgaccgtgcag
ggcgtcaccctcgcctcactgcactcctccaagggcctggagtgggacgtcgtcttcctg
gtcggtgtcgccgagggcatgatgccgatcacctacgccaagaccgacgaacagatcgag
gaagagcggcgcctcctgtacgtcggcgtcacccgcgccagacagcacctgtccgtctcc
tgggcactgtcccgctcacccggggggcgcccgaaccgccggcccagccgcttcctcgac
gggctgcgtcccggctcggtcaccaccacgggccgcggcgccagggccggcgccgcggga
ggcatcgagcgcggcttcgcgggctccgccaccagccccgccccgcgccgcaccagcagg
atcccggcccgctgccgggtctgcggccgcacgttgagcgacgcgggcgagatgaagctg
atgcgctgtgaggactgcccctcagacatggacgagggactctacgagcggttgcgtgag
tggcgggcggtgcaggcgcagcgcagcgggcagcccgcgttctgcgtcttcaccgacaag
accctgatggcgatcgccgaggccgtgcccgacgacgagggcgatctggcgcggatcccc
ggggtcggggtgcgcaagctcaatcgctacggagccgacgttctcagcatctgcgcaggt
caggaagttgaggtgggcgccgagggtgactga
DBGET
integrated database retrieval system
