Streptomyces avermitilis: SAVERM_3076
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Entry
SAVERM_3076 CDS
T00126
Symbol
adnB
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sma
Streptomyces avermitilis
Pathway
sma03420
Nucleotide excision repair
sma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAVERM_3076 (adnB)
03430 Mismatch repair
SAVERM_3076 (adnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sma03400
]
SAVERM_3076 (adnB)
Enzymes [BR:
sma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAVERM_3076 (adnB)
DNA repair and recombination proteins [BR:
sma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAVERM_3076 (adnB)
MMR (mismatch excision repair)
Other MMR factors
SAVERM_3076 (adnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAC70787
UniProt:
Q82IQ7
LinkDB
All DBs
Position
complement(3838556..3842164)
Genome browser
AA seq
1202 aa
AA seq
DB search
MLLPAMRLIGPPLSVAAASLSDVPARITDPEQLKELLGIPFTPEQTACITAPPAPQVIVA
GAGSGKTTVMAARVVWLVGTGQVAPEQVLGLTFTNKAAGELAERVRKALVKAGITDPDVI
DPDNPPGEPVISTYHAFAGRLLTDHGLRIGLEPTARLLADATRYQLAARVLREAPGPYPA
LTRSFPDLVGDLLTLDSELAEHLVRPEELRAYDAELLSSLEGAKLSNAELRKIPETAAAR
RELADLVVRYRAAKRERDLLDFGDQIALSATLARTRAEVGAILRDEFRVVLLDEYQDTSV
AQRVLLAGLFGGGTGHPVTAVGDPCQAIYGWRGASVANLDDFPEHFAHADGRLATRQALS
ENRRSGGRLLDLANGLAEPLRALHAGVEALRPAPGAEHDGQVRCALLRTHAEEIDWIADS
LAHLVRTGKEPGEIAVLCRTATDFAEIQGALVARDVPVEVVGLSGLLHLPEVADLVAVCE
VLQDPGANASLVRLLTGPRWRIGPRDLALLGRRARLLVSHARVGADDDPDRRLAAAVEGV
DPSEVISLADALDTFLEAPLEDPAEADDGLPFSADARVRFARLAAELRDLRRSLADPLMD
VLHRVLAVTGLEVELSASPHALAARRRETLSNFLDVAASFAASDGEATLLAFLGFLRTAA
QYEKGLDNALPGGENTVKVLTAHKSKGLEWDVVAVPGLVTGTFPSTQGREKWTAQGKVLP
HELRGDADTLPDIEAWDSRGMKAFHEAMKEHQHTEELRLGYVTFTRPRSLLLGSGHWWGP
SQKRPRGPSDFLHALYEHCAAGYGEIEAWAEEPEENEENPALHEAAADHAWPLPLDDTAL
ARRRAAAETVLAYLERVASHENAHPSAPSAVHDPTSYDDPDWPPPEDAESPHEDPFDEAY
GDLAHDEAPYGEDDVPEEGLLEDDGDDDADWESWSTDRPTVPHQAAAPEARPHPAGPPPL
TPEEARTIASWDRDLDALTGELLRARASVTDVPLPASLTASQLLELAADPDGFAQELARP
MPRPPQPAARRGTRFHAWVEARFEELRLPMLEPDELPGSEAEIADERDLEALKDAFERTP
YAHRTPYRVEVPFQLAIAGRVVRGRIDAVYRKEGNDGTTYEIVDWKTSRTRTADPLQLAV
YRLAWAEQQGVPLESVTTTFLYVRSGEVVRPDGLPDRAALERLLLDEPSSGEPPGERVTE
GR
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcttccagccatgcggctgattggtcctccactgtcagtggccgccgctagcctc
tctgacgtgccagcccgtatcaccgaccccgagcagctcaaggagctcctcggcatcccg
ttcaccccggagcagacggcctgcatcaccgcaccgcccgccccgcaggtgatcgtggcc
ggagccggatcgggcaagaccaccgtgatggcggcacgcgtggtctggctggtcggtacc
gggcaggtggcccccgagcaggtgctgggcctgacgttcaccaacaaggccgccggtgaa
ctcgccgagcgcgtccgcaaggcactcgtcaaggcgggcatcacagacccggacgtgatc
gacccggacaacccgccgggcgagccggtgatctccacgtaccacgccttcgcgggccga
ctgctgaccgaccacggcctgcgcatcgggctcgaacccaccgcccgcctgctcgccgac
gccacccgctaccagctcgccgcgcgcgtgctgcgtgaggccccgggcccgtacccggcg
ctgacccgctccttcccggacctcgtcggcgatctcctcaccctcgactccgaactcgcc
gagcacctggtgcgccccgaggagctgcgcgcatacgacgccgagctgctgagctcactg
gagggcgccaagctctccaacgccgagctgcgcaagatccccgaaacggcagccgcccgt
cgtgagctggccgacctggtggtgcgctaccgggccgccaagcgcgagcgcgacctcctc
gacttcggtgaccagatcgccctctcggcgaccctggcacgcacgcgtgcggaggtcgga
gccatcctgcgggacgagttccgcgtagtgctcctcgacgagtaccaggacacatcggtc
gcccagcgcgtcctgctcgccgggctgttcggcggtggcaccgggcaccccgtgaccgcc
gtcggcgacccctgccaggcgatctacggctggcgcggcgcctccgtcgccaacctcgac
gacttccccgagcacttcgcgcacgccgacggccgcctcgcgacccgccaggccctcagc
gagaaccgccgcagcggcggccgcctcctcgacctcgccaacggcctcgccgagcccctg
cgcgccctgcacgcgggcgtggaggccctgcgcccggccccgggtgccgagcacgacggc
caggtccggtgcgcgctgctgcgcacccacgccgaggagatcgactggatcgccgactcc
ctcgcccacctcgtgcgcaccgggaaggagcccggcgagatcgccgtcctgtgccgcacc
gcgacggacttcgccgagatccagggcgcgctcgtcgcccgcgacgtccccgtcgaggtc
gtcggcctctccggactgctccatctgcccgaggtcgccgatctcgtcgccgtctgcgaa
gtcctccaggaccccggtgccaacgcctctctcgtacggctcctcaccggcccgcgctgg
cgcatcggcccgcgcgacctcgctcttctgggacggcgcgcccgcctgctcgtgtcccac
gcacgcgtgggggccgacgacgaccccgaccgccggctcgccgcggccgtcgagggggtc
gacccgtccgaggtgatctcgctcgcggacgcgctcgacacgttcctggaagcgcccctc
gaagatcccgcggaggcggacgacgggctgccgttctcggccgacgcgcgcgtacggttc
gcacggctcgccgccgaactgcgtgacctgcgccgctcgctcgccgaccccctgatggac
gtcctgcaccgggtcctcgccgtcaccggtctggaggtggagctgtccgcgtccccgcac
gcgctggccgcgcgccgacgcgagacgctgtcgaacttcctggacgtcgccgcatccttc
gccgcgagcgacggcgaggcgacgctccttgccttcctcggcttcctgcgcaccgccgcc
cagtacgagaagggtctcgacaacgcgctgccgggcggtgagaacaccgtcaaggtgctc
accgcgcacaagtccaagggcctggaatgggacgtcgtcgcggtccccgggctggtcacc
gggacgttcccgagcacccagggccgcgagaagtggaccgcgcagggcaaggtcctcccg
cacgagctgcgcggcgacgccgacacgctgcccgacatcgaggcctgggactccagaggc
atgaaggccttccacgaggccatgaaggagcaccagcacaccgaggagctccgcctcggc
tatgtcaccttcacccgcccccgctccctgctcctcggctccggccactggtggggcccg
tcccagaagcgcccgcggggtccgtcggacttcctgcacgccctgtacgagcactgcgcg
gccgggtacggcgagatcgaggcgtgggcggaggagcccgaggagaacgaggagaacccg
gccctgcacgaggcggccgccgaccacgcctggccacttcccctcgacgacacggcgctg
gcccgccgccgggcggccgccgagaccgtactcgcctacctggagcgagtcgcctcgcac
gagaacgcccacccctcggcgccctcggccgtccacgacccgacgtcgtacgacgacccg
gactggccgccaccggaggacgccgaaagcccccacgaagatcccttcgacgaggcctac
ggcgatctcgcccacgacgaggccccctacggggaggacgacgtcccggaggaaggcctc
ctcgaagacgacggcgacgacgacgccgactgggagtcctggtcgacggaccggccgacg
gtgccccaccaagcagcggctccggaggctcgtccccacccggcgggcccgccgcccctc
acgcccgaggaagcacgcaccatcgcctcctgggaccgcgacctggacgccctcaccgga
gagctgctgcgcgcccgcgcgagcgtcaccgacgtgcccctgccggcgtcgctgaccgcg
tcgcagctcctggagctggccgccgacccggacggcttcgcccaggagctcgcgcgcccc
atgccgcgccccccgcagcccgccgcacgccgcggcacccgcttccacgcctgggtcgag
gcccgcttcgaggagcttcggctgcccatgctggagccggacgagctgcccggcagcgaa
gccgagatcgccgacgaacgcgacctggaggccctcaaggacgccttcgaacgcactccc
tacgcccaccgcacgccgtaccgcgtggaggtccccttccagctcgcgatcgcgggacgc
gtcgtacgcggccgcatcgacgccgtctaccggaaagaggggaacgacgggacgacgtac
gagatcgtcgactggaagaccagccgcacccgcaccgcggaccccctccagctcgccgtg
taccggctcgcgtgggccgagcagcagggtgtgcccctggagtccgtcacgaccacattc
ctgtacgtacgcagcggcgaggtcgtacggcccgacggtctcccggaccgggccgcgctg
gagcggctgctcctggacgagccgtcctccggtgaaccgccgggcgagcgtgtcactgag
ggccgatag
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