Streptomyces avermitilis: SAVERM_3098
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Entry
SAVERM_3098 CDS
T00126
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase
Organism
sma
Streptomyces avermitilis
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
BAC70809
UniProt:
Q82IN5
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Position
3871098..3873377
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AA seq
759 aa
AA seq
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MTLPVALSGSDVIGQAKTGTGKTLGFGLPLLERVTVPADVEAGRARPEQLTDAPQALVVV
PTRELCTQVTNDLLTAGKVRNVRVLAIYGGRAYEPQVEALKKGVDVIVGTPGRLLDLAGQ
KKLDLKHIKALVLDEADEMLDLGFLPDVEKIINMLPARRQTMLFSATMPGAVIGLARRYM
SQPTHIRATAPDDEGATVRNTAQFIYRAHNMDKPEMVSRILQADGRGLAMVFCRTKRTAA
DLADQLQQRGFASGAVHGDLGQGAREQALRAFRNGKVDVLVCTDVAARGIDVEGVTHVIN
YQSPEDEKTYLHRIGRTGRAGAKGIAITLVDWDDIPRWQLINKALDLGFNDPPETYSTSP
HLFEELNIPAGTKGVLPRSERTRAGLAAEKVEDLGETGGRGARGRGGRPSSADRDRDRDR
DRDRERTPRRRRRTRNGETVDAAAVTPVTPAEAPADSADSPASTEPRTPRRRRRTRGGAT
GEPVASVNGTAVTEAVVTEAARTAVDTAEGTEAAESAKPRRRRTRKTAETPVAAPEVTLE
APATDAAEAPAAPRRRTRKAAETVVDTAEAVATTEEPEAKPRRRTRKAAEAAVDTAEAVA
TTEEPEAKPRRRTRKAAEAAVDTAEGAAAAAPEAVEAPAAPRRRTRKTAEAAVDTAEAVA
TTEEPEAKPRRRTRKAAETAVDTAEGVAAEPTEAKPRRTRKTAVAADAEPTEAKPRRTRK
TAVAAEAAIPAQTAEEAAEPAKPRRRTRKATAAAEPAES
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgacgctccccgtggccctttcgggctcggacgtcatcggccaggccaagaccggcacc
ggcaagacgctgggcttcggccttccgctcctcgagcgcgtcaccgtccccgccgacgtc
gaggccggccgcgcccggcccgagcagctcaccgacgcaccgcaggcgctcgtcgtcgtg
cccacgcgcgagctgtgcacccaggtcaccaacgacctgctgaccgcgggcaaggtccgc
aatgtgcgcgtgctcgccatctacggcggccgggcgtacgagccgcaggtcgaggccctg
aagaagggcgtcgacgtgatcgtcggcaccccgggccgcctgctggacctcgcgggccag
aagaagctcgacctcaagcacatcaaggcgctcgtcctcgacgaggccgacgagatgctc
gacctgggcttcctgcccgacgtcgagaagatcatcaacatgctgccggcccgccgccag
accatgctgttctcggcgaccatgccgggcgcggtcatcggcctcgcgcgccgctacatg
tcgcagcccacgcacatccgcgccacggcgccggacgacgagggcgcgacggtccgcaac
accgcgcagttcatctaccgcgcgcacaacatggacaagccggagatggtctcgcgcata
ctgcaggccgacggccgcggtctcgcgatggtcttctgccgcaccaagcggacggcggcg
gacctcgccgaccagctccagcagcgcggtttcgcctccggcgcggtccacggcgacctc
ggccagggcgcccgcgagcaggcgctgcgcgccttccgcaacggcaaggtcgacgtcctc
gtctgcaccgacgtcgccgcccgcggcatcgacgtcgaaggcgtcacccacgtcatcaac
taccagtcccccgaggacgagaagacgtacctgcaccgcatcggccgtacgggccgcgcg
ggcgccaagggcatcgcgatcaccctcgtcgactgggacgacatcccgcgctggcagctc
atcaacaaggcgctggacctgggcttcaacgacccgccggagacgtactccacgtccccg
cacctcttcgaggaactgaacattcccgcgggcaccaagggtgtcctgccgcgttccgag
cgcacgcgcgctggtctggcggcggagaaggtcgaggacctgggcgagaccggcggccgc
ggtgcacgcggtcgcggcggccggccctcgtccgccgaccgggatcgcgaccgcgaccgc
gaccgcgaccgtgagcgcaccccgcgccgccgccgtcgtacgcgcaacggcgagaccgtc
gacgcggcagcggtgaccccggtcaccccggccgaggcgcccgcggactccgccgattcc
cccgcgtccacggagccgcgcacgccgcgccgccgtcgccgcacgcgtggcggagcgacg
ggcgagccggtcgcctcggtgaacgggaccgccgtgaccgaggccgtcgtgaccgaggcc
gcgcggacggccgtggacacggcggagggcacggaggccgcggagtccgcgaagccgcgc
cgccgtcgcacccgtaagacggcggagacccccgtcgcagcgcccgaggtcacgcttgag
gcgccggccacggacgccgccgaggctccggccgcgccgcgtcgccgtacccgcaaggcc
gccgagaccgtcgtcgacaccgccgaggccgtcgcgacgacggaggagcccgaggccaag
ccgcgacgccgtacccgcaaggccgccgaggccgccgtcgacaccgccgaggccgtggcg
acgacggaggagcccgaggccaagccgcgccgacgcacccgcaaggccgcggaagccgcc
gtcgacaccgccgagggtgctgccgcggccgcccccgaggccgtggaagcaccggccgcg
ccgcgacgccgtacccgcaagacggccgaggccgccgtcgacaccgccgaggccgtggcg
acgacggaggagcccgaggccaagccgcgccgacgcacccgcaaggccgcggagaccgcc
gtcgacaccgccgagggcgttgccgcggagcccaccgaggccaagccgcgccgcacccgc
aagaccgcggtggcggccgacgcggagcccaccgaggccaagccccgccgcacccgcaag
acggccgtggcagccgaggccgcgatccccgcacagacggccgaggaagcggcggagccc
gcgaagccgcgccgccgtacccgcaaggccacagcggccgcggagcctgcggagagctga
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