Streptomyces avermitilis: SAVERM_3161
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Entry
SAVERM_3161 CDS
T00126
Symbol
dapF2
Name
(GenBank) putative diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sma
Streptomyces avermitilis
Pathway
sma00300
Lysine biosynthesis
sma00470
D-Amino acid metabolism
sma01100
Metabolic pathways
sma01110
Biosynthesis of secondary metabolites
sma01120
Microbial metabolism in diverse environments
sma01230
Biosynthesis of amino acids
Module
sma_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAVERM_3161 (dapF2)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAVERM_3161 (dapF2)
Enzymes [BR:
sma01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SAVERM_3161 (dapF2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BAC70872
UniProt:
Q79ZA3
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All DBs
Position
complement(3938765..3939688)
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AA seq
307 aa
AA seq
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MGEHSTSSTVVTPASTPSASSPPAEFEESAEFFTYHALGNDYVVVDPRGSDFTPGPAAVR
LLCDRHFGVGADGVLFGPLGAPEAGEPVRLRMFNSDGTECEKSGNGLRMFALHLAETYGE
PWSGDEEFPLRTAAGDVPVRILDLASGTVQVGMGRPEFGATGESLDVGGRRLAVTSVHNG
NPHAVVPLAEISAGLARELGPLIAGHTRFPGRTNVQFLAIVDRRTIAIEVYERGAGYTLA
SGSSACAAAAAAHALGLTGPDVEVRMPGGRIDVSIAADGSVSMTGTAERISSGRFSPVFR
NKLETAR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaacattcgacgtcctcgacggtcgtgacacccgcgtcgacgccttcggcgtcc
tcgccgcccgcggagttcgaggagtccgcggagttcttcacctaccacgcgctcggcaac
gactacgtggtcgtcgacccgcgcggcagcgacttcacgcccggccccgcggccgtgcgg
ctgctgtgcgaccggcacttcggggtcggcgcggacggagtgctgttcggaccgctcggg
gcaccggaagccggtgaaccggtgcgcctgaggatgttcaactccgacggcaccgagtgc
gagaagagcggcaacggactgcggatgttcgctctgcatctggccgaaacctacggcgag
ccgtggagcggggacgaggagttcccgctccgcacggccgccggtgacgtaccggtacgc
atcctcgacctcgcctcggggaccgtccaggtcggcatgggccggcccgagttcggggcg
acgggcgagagcctcgacgtcggcgggcgccgcctcgcggtcacctccgtgcacaacggg
aacccgcacgcggtcgtcccgctggcggagatctccgccggcctcgcccgcgaactgggg
cccctgatcgccggacacacccgcttcccgggacgcacgaacgtgcagttcctggcgatc
gtggaccgccggacgatcgccatcgaggtctacgaacgcggcgccggctacaccctcgcc
tccggcagcagcgcctgcgccgccgccgcggccgcgcacgccctcggcctgaccggcccg
gacgtggaagtacgcatgcccggcggccggatcgacgtctcgatcgcggcggacggctcc
gtctccatgaccggcaccgccgagcggatcagcagcggccgcttctcacccgtcttccgg
aacaagctggagaccgcacgatga
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