Streptomyces avermitilis: SAVERM_3417
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Entry
SAVERM_3417 CDS
T00126
Symbol
trpS1
Name
(GenBank) putative tryptophanyl-tRNA synthetase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
sma
Streptomyces avermitilis
Pathway
sma00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAVERM_3417 (trpS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sma01007
]
SAVERM_3417 (trpS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sma03016
]
SAVERM_3417 (trpS1)
Enzymes [BR:
sma01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
SAVERM_3417 (trpS1)
Amino acid related enzymes [BR:
sma01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SAVERM_3417 (trpS1)
Transfer RNA biogenesis [BR:
sma03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SAVERM_3417 (trpS1)
Prokaryotic type
SAVERM_3417 (trpS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BAC71129
UniProt:
Q82HU1
LinkDB
All DBs
Position
complement(4238566..4239579)
Genome browser
AA seq
337 aa
AA seq
DB search
MASDRPRVLSGIQPTAGSFHLGNYLGAVRQWVALQESHDAFYMVVDLHAITVPQDPADLR
ANTRLAAAQLLAAGLDPERCTLFVQSHVPEHAQLAWIMNCLTGFGEASRMTQFKDKSAKQ
GADRASVGLFTYPVLQVADILLYQANEVPVGEDQRQHIELTRDLAERFNGRFGETFTVPK
PYILKETAKIFDLQDPSIKMSKSASTPKGLINLLDEPKATAKKVKSAVTDTDTVIRYDAE
HKPGISNLLTIYSTLTGTGIPELEEKYTGKGYGALKTDLAEVMVDFVTPFRERTQQYLDD
PETLDSILAKGAEKARAVAAETLSQAYDRVGFLPAKH
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgatcgtccccgcgtgctctccggaatccagcccaccgcaggctcgttccac
ctcggcaactacctcggcgccgtccgccagtgggtggccctccaggagtcccacgacgcg
ttctacatggtcgtcgacctgcacgcgatcaccgtcccgcaggatccggccgatctgcgc
gccaacacccggctcgccgccgcgcagctgctcgccgcgggcctcgacccggagcgctgc
acgctcttcgtccagagccacgtcccggagcacgcgcagctcgcctggatcatgaactgt
ctcaccggtttcggcgaggcctcccgcatgacccagttcaaggacaagtccgccaagcag
ggcgccgaccgcgcgagcgtcggcctgttcacgtacccggtcctccaggtcgccgacatc
ctgctgtaccaggccaacgaggtcccggtgggcgaggaccagcgccagcacatcgagctc
acccgcgacctcgccgagcgcttcaacggccgcttcggcgagacgttcacggtcccgaag
ccgtacatcctcaaggagacggcgaagatcttcgatctccaggacccgtcgatcaagatg
agcaagtcggcgtccacgcccaagggcctcatcaacctcctcgacgagccgaaggccacc
gccaagaaggtcaagagcgcggtcaccgacaccgacaccgtcatcaggtatgacgcggag
cacaagccgggtatcagcaatctgctgaccatctactcgaccctcaccggaaccggtatc
ccggaactcgaggagaagtacaccggcaagggctacggtgcgctgaagacggacctcgcc
gaggtcatggtcgacttcgtgaccccgttccgggagcgcacccagcagtacctggacgac
ccggagaccctcgactcgatcctggccaagggcgcggagaaggcgcgtgccgtggccgcg
gagacgctctcccaggcgtacgaccgggtgggcttcctgcccgccaagcactga
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