Streptomyces avermitilis: SAVERM_3463
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Entry
SAVERM_3463 CDS
T00126
Symbol
uvrD1
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sma
Streptomyces avermitilis
Pathway
sma03420
Nucleotide excision repair
sma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAVERM_3463 (uvrD1)
03430 Mismatch repair
SAVERM_3463 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sma03400
]
SAVERM_3463 (uvrD1)
Enzymes [BR:
sma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAVERM_3463 (uvrD1)
DNA repair and recombination proteins [BR:
sma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAVERM_3463 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
SAVERM_3463 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Birna_VP4
Motif
Other DBs
NCBI-ProteinID:
BAC71175
UniProt:
Q82HP5
LinkDB
All DBs
Position
complement(4293057..4295642)
Genome browser
AA seq
861 aa
AA seq
DB search
MSSLFDDSFLADLKPSRAHEEEPPPPPEDDHVPESVPDDLFGGKFDVPPDRDTYYRDGAP
RPAVDPATLLHGLNENQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAHLLGERHVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKRLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAM
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGVPGPGGGARPEDEPPREDDLEPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATT
ILLEQNYRSTQTILSAANAVIERNESRRPKNLWTNAGAGAQITGYVADTEHDEAQFVADE
IDRLTDAGEAKAGDVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYL
RVLSNPEDSVPLRRILNVPKRGIGDRAEAMIDALSQREKISFAQALRRVDEAYGMAARST
NAVKRFNTLMEDLRTIAESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAA
VALEFEQESGAGEEAATGDAAGDAAGDAAGDAPGGAPGAASGDLSAFLERVALVADSDQI
PDEEDGNGVITLMTLHTAKGLEFPVVFLTGMEDGVFPHMRSLGQTKELEEERRLAYVGIT
RARERLYLTRSSLRSAWGQPSYNPPSRFLEEIPDAHLEWKRKGASAAPLSSGPASGVAAS
LSSSRSRSAVSGASGFATRRGGASEKPVASLAVGDRVTHDQFGLGTVVGVKGTGGNAEAT
IDFGDTKPKRLLLRYAPVEKL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgatgacagcttcctggcggacctcaagccctcgcgggcccacgag
gaggagcccccgccgccgcccgaggacgatcacgtaccggagtcggttccggacgatctg
ttcggcgggaagttcgacgtgccgccggaccgggacacgtactaccgcgacggagccccc
cgccccgccgtggacccggccacgctcctgcacgggctgaacgagaaccagcgcgcggcc
gtggtgcacgccggttcccccctgctcatcgtggccggtgccggctccggcaagacgcgc
gtgctcacgcaccggatcgcgcacctgctgggtgagcgccatgtgcaccccggccagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctg
gtcggcccgcgcgccaacgcgatgtgggtgatgacgttccacagcgcgtgcgtgcgcatc
ctgaggcgtgaatcgaagaggctcgggttcacctcctccttctcgatctacgacgccgcc
gacagcaagcgtctgatggccctggtctgccgcgacctggacctcgaccccaagcgcttc
ccgccgaagtccttcagcgccaagatctcgaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccgcagacggcttcgagaagaccctcgcccaggcgtacgccatg
taccagtcgcggctgcgtgaggccaacgcgctcgacttcgacgacctgatcatgacgacg
gtcaacctgctgcgggccttcccggacgtcgccgagcactaccgccgccgtttccgccac
gtcctcgtcgacgagtaccaggacacgaaccacgcgcagtacgccctggtcagggagctg
gtcggggttccgggaccgggtggcggcgcccgcccggaggacgagccgccccgcgaggac
gacctcgagcccgccgagctgtgcgtcgtgggtgacgccgaccagtcgatctacgccttc
cgcggcgcgaccatccgcaacatcctccagttcgaggaggactacccggacgcgacgacg
atcctcctggagcagaactaccgctccacccagacgatcctcagcgcggccaacgcggtc
atcgagcgcaacgagtcccgtcgccccaagaacctgtggaccaacgcgggcgccggcgcg
cagatcaccggctatgtcgccgacaccgagcacgacgaggcgcagttcgtcgccgacgag
atagaccggctgacggacgcgggcgaggcaaaggcaggagacgtcgccgtcttctaccgg
acgaacgcgcagtcccgtgtcttcgaagagatcttcatccgcgtcggcctgccctacaag
gtcgtcggcggtgtccgcttctacgagcgcaaggaggtccgggacgtcctggcctacttg
cgggtcctgtccaacccggaggactcggtcccgctgcgccgcatcctgaacgtgcccaag
cgcggcatcggcgaccgcgcggaagcgatgatcgacgccctctcccagcgcgagaagatc
agcttcgcgcaggcgctgcgccgcgtcgacgaggcgtacgggatggcggcccgctccacg
aacgccgtcaagcggttcaacacgctgatggaggacctgcggacgatcgccgagtcgggc
gcgggcccggcgacggtcctggaggccgtgctcgaacgcaccggctacctggcggagttg
caggcgtcgacggacccgcaggacgagacccgcatcgagaaccttcaggaactcgccgct
gtggcgctggagttcgagcaggagtccggggcaggggaggaggccgcgacaggcgatgcg
gcgggcgacgcggcaggcgacgcggcaggcgacgcgccgggtggtgcgccgggcgcggcg
tcaggtgatctctcggcgttcctcgagcgggtcgcgctcgtcgccgactccgaccagatc
ccggacgaggaggacggcaacggagtcatcaccctgatgaccctgcacaccgccaagggc
ctcgaattcccggtcgtcttcctcaccggcatggaggacggcgtcttcccgcacatgcgg
tcgctcggccagaccaaggaactggaggaggagcggcgcctcgcgtacgtcggcatcacc
cgcgcgcgggagcggctgtacctcacccgttcgtccctgcgcagcgcgtggggccagccc
tcgtacaacccgccgtcccgcttcctggaggagatcccggacgcgcatctggagtggaag
cggaagggggcgtccgctgctccgctgtcttcggggccggcctcgggcgtggcggcctcg
ctgtcgtcgtcgcgctcgcgctccgcggtctcgggggcgtccggcttcgccacgcgccgg
ggcggtgcgtccgagaagccggtggcctcactggcggtcggggaccgggtcacgcacgac
cagttcggcctcggcacggtggtcggcgtgaagggcacgggcgggaacgcggaggcgacg
atcgacttcggcgacacgaagccgaagcggctgctgctccggtatgcgccggtggagaag
ctttag
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