Streptomyces avermitilis: SAVERM_3912
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Entry
SAVERM_3912 CDS
T00126
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sma
Streptomyces avermitilis
Pathway
sma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SAVERM_3912
09124 Replication and repair
03420 Nucleotide excision repair
SAVERM_3912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sma03021
]
SAVERM_3912
03400 DNA repair and recombination proteins [BR:
sma03400
]
SAVERM_3912
Enzymes [BR:
sma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAVERM_3912
Transcription machinery [BR:
sma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SAVERM_3912
DNA repair and recombination proteins [BR:
sma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SAVERM_3912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
ETAA1
Motif
Other DBs
NCBI-ProteinID:
BAC71624
UniProt:
Q82GI5
LinkDB
All DBs
Position
4832156..4833799
Genome browser
AA seq
547 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHEQANECRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVQYSRYPVPHALLVDIAETMDRYGRLTLSKHPAHGLVLTTTDRPVLEEILR
SKRVAPLVGARLDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELAEDGWA
LRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGSMAQAKATTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTKKEIRPVTIATYQVLTTRRKGVYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTETERLAYATAETEEKYRFCATTATKRKVTEALVRKFAGQQILVIGQYIDQ
LDELGEHLNAPVIKGETSNAQREKLFDAFREGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIMDA
DELLTES
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgaatggtccactcatcgtccagagcgacaagacactcctgctcgaagtcgaccacgag
caggcgaacgagtgccgacgggccatcgcgccgttcgccgagctggagcgggcgcccgag
cacatccacacctaccgggtgaccccgctcgggctgtggaacgcgcgggccgccgggcac
gacgccgagcaggtcgtggacgcgctcgtgcagtacagccggtaccccgtgccgcatgcc
ctgctcgtggacatcgccgagacgatggaccgctacgggcggctgacgctctccaagcac
ccggcccacgggctggtgctcacgacgacggaccggcccgtgctcgaggagatcctccgg
tccaagcgggtcgccccgctcgtcggcgcccgcctcgaccccgacaccgtcgccgtgcac
ccctccgagcgcgggcagatcaagcagacgctgctgaagctgggctggcccgccgaggac
ctcgccggttacgtcgacggggaggcgcacccgatcgagctggccgaggacggctgggcg
ctgcggccgtaccagaagcaggccgtggagaacttctggcacggcggctccggcgtggtc
gtgctgccctgtggcgcgggcaagacgctcgtcggtgccgggtccatggcgcaggccaag
gccaccacgctcatcctcgtcaccaacaccgtctccgcccgccagtggaagcacgagctg
gtgaagcggacgagtctcaccgaggacgagatcggtgagtacagcggtacgaagaaggag
atccggccggtcaccatcgccacgtaccaggtgctgacgaccaggcggaagggcgtctac
ccgcacctggagctgttcgactcccgtgactggggactcatcgtctacgacgaggtgcat
ctgctgccggcgcccgtcttcaagttcaccgccgatctccaggcgcggcggcggctgggg
ctgacggcgaccctcgtgcgggaggacgggcgcgagtcggacgtcttctcgctcatcggg
cccaagcggttcgacgctccgtggaaggagatcgaggcgcaggggtacatcgcgcccgcc
gactgcgtggaggtgcgggtcaatctgacggagaccgagcggctcgcgtacgcgaccgcc
gagaccgaggagaagtatcgcttctgcgccaccacggcgacgaagcggaaggtgacggag
gcgctggtccggaagttcgccgggcagcagatcctcgtcatcggccagtacatcgaccag
ctcgacgagctgggcgagcacctgaacgcgcccgtcatcaagggcgagaccagcaacgcg
cagcgcgagaagctcttcgacgccttccgggagggcgagatcagcgtcctcgtcgtctcc
aaggtcgcgaacttctccatcgacctgccggaggcgaccgtcgccatccaggtgtcgggc
acgttcggctcgcgccaggaggaggcgcagcggctgggccgcgtcctgcggcccaaggcg
gacggccaccaggcccacttctactcggtcgtcgcccgcgacaccatcgaccaggacttc
gccgcgcaccgccagcgcttcctggcggagcagggctacgcctaccggatcatggacgcg
gacgagctcctgacggagagctga
DBGET
integrated database retrieval system
