Streptomyces avermitilis: SAVERM_4123
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Entry
SAVERM_4123 CDS
T00126
Name
(GenBank) putative ATP-dependent RNA helicase
Organism
sma
Streptomyces avermitilis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BAC71835
NITE:
SAV4123
UniProt:
Q82FX9
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Position
complement(5057467..5059710)
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AA seq
747 aa
AA seq
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MPKNSGRFAFRMSVSSTDHIVVPENNEGDTNEGVQAIETVEIVETVESAPELTFGDLGLP
EGVVRKLAQNGVTAPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLARLAGGHTD
KKKPRAVILTPTRELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYALERGVDVLVAT
PGRLRDIINRGACSLANVEVAVLDEADQMSDLGFLPEVTELFDQIPAGGQRMLFSATMEN
EISTLVKRYLTNPVTHEVDSAQGNVTTMSHHILVVKPKDKAPVTAAIASRKGRTIIFVRT
QLGADRIAEQLRDAGVKADALHGGMTQGARTRTLADFKDGYVNALVATDVAARGIHVDGI
DLVLNVDPAGDHKDYLHRSGRTARAGRSGTVVSLSLPHQRRQIFRLMEDAGVDAARHIIN
SGTAFEPEVAEITGARSMTEVQAQSAGDAAQQAEREVTQLTKELERAQRRAAELRGEADR
LVARAARERGEDPEAAVAAAAEAVAEQAVVAQAPAEAPVSEQPAERPAYEQSRQRRDERG
NYERRDDRGGRSFERRDDRGGFNRDRRDNDRGGFRRDDRRDDRGGRSFERRDDRGGFNRD
DRGGFNRDRRDDRGGRSFERRDDRGGAGRDDRGGFNRDRRDDRGGAGRDDRGGRSFERRD
NDRGGFRRDNDRGGRTFERRDERGGHRGSDRPFNRDRQDNRPSSGARSGSHDRPYARRDD
HRGTTGTGTSTGSFGRRDDKPRWKRNG
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaagaactccggaaggttcgcatttcgcatgtctgtttccagtactgatcacatc
gtcgtgcccgagaacaacgagggcgacaccaacgagggcgtccaggccatcgagaccgtc
gagatcgttgagaccgtggagtccgctcccgagctcaccttcggcgacctgggcctgccc
gagggcgtcgtccgcaagctcgcgcagaacggtgtgaccgcccccttcccgatccaggcg
gcgaccatcccggacgccctggccggcaaggacatcctcggccgcggccgcaccggctcc
ggcaagaccctctccttcggtctgccgaccctggcgcgactcgccggcggccacaccgac
aagaagaagccgcgcgccgtcatcctcaccccgacccgtgagctcgcgatgcaggtcgcg
gacgcgcttcagccgtacggcgacgtcctcggcctgaagatgaaggtcgtctgcggcggt
acgtcgatgggcaaccagatctacgccctggagcgcggcgtcgacgtcctcgtcgccacc
ccgggccgactgcgcgacatcatcaaccgcggtgcctgctcgctcgcgaacgtcgaggtc
gccgtcctcgacgaggccgaccagatgtccgacctgggcttcctgcccgaggtcaccgaa
ctgttcgaccagatcccggccggcggtcagcgcatgctgttctcggccaccatggagaac
gagatctccacgctggtcaagcgctacctgaccaacccggtcacgcacgaggtcgacagc
gcccagggcaacgtcacgacgatgtcgcaccacatcctcgtcgtgaagcccaaggacaag
gcgccggtcaccgccgcgatcgcctcccgcaagggccgcacgatcatcttcgtccgtacg
cagctcggcgccgaccgtatcgccgagcagctgcgcgacgccggtgtgaaggccgacgcg
ctgcacggcggcatgacccagggcgcgcggacgcggacgctggccgacttcaaggacggc
tacgtcaacgcgctcgtcgcgaccgatgtcgccgcccgcggtatccacgtcgacggcatc
gacctggtcctgaacgtggacccggccggcgaccacaaggactacctgcaccgctccggc
cgtaccgctcgcgcgggccgctccggcaccgtcgtgtcgctgtccctgccgcaccagcgc
cgccagatcttccggctgatggaggacgcgggcgtcgacgccgcgcgtcacatcatcaac
tccggtacggccttcgagcccgaggtcgccgagatcaccggcgcccgctcgatgaccgag
gtccaggcccagtccgcgggcgacgccgcccagcaggccgagcgtgaggtcacgcagctc
acgaaggagctggagcgcgcgcagcgtcgtgcggccgagctgcgcggtgaggccgaccgt
ctggtcgcccgtgccgcgcgcgagcggggcgaggacccggaggcggccgtcgccgcggcc
gccgaggccgtcgccgagcaggccgtcgtggcccaggctccggccgaggccccggtctcc
gagcagcccgccgagcgtcccgcgtacgagcagtcgcgtcagcgtcgtgacgagcggggc
aactacgagcgccgtgacgaccgcggtggccgttccttcgagcgtcgtgacgaccggggc
ggcttcaaccgcgaccgtcgtgacaacgaccgtggtgggttccgtcgtgacgaccgtcgc
gatgaccgtggtggccgttctttcgagcgtcgtgacgaccgcggtggcttcaaccgtgac
gaccgtggtggcttcaaccgcgaccgccgtgacgaccgcggtggccgttccttcgagcgt
cgtgacgaccgcggtggtgccggccgtgacgaccggggtggcttcaaccgcgaccgccgt
gacgaccgcggcggcgccggccgtgacgaccgtggcggccgttccttcgagcgtcgtgac
aacgaccgtggtgggttccgtcgggacaacgaccgcggcggccgtaccttcgagcgtcgt
gacgagcgtggcggccaccgtggcagcgaccgtcccttcaaccgtgaccgtcaggacaac
cgcccctccagcggtgcccgctccggcagccacgaccgtccgtacgcccgtcgtgacgac
caccgtggcaccaccggcacgggaaccagcaccggttccttcggccgccgcgacgacaag
ccgcgctggaagcgcaacggctga
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