Streptomyces avermitilis: SAVERM_4395
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Entry
SAVERM_4395 CDS
T00126
Symbol
aspS
Name
(GenBank) putative aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sma
Streptomyces avermitilis
Pathway
sma00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAVERM_4395 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sma01007
]
SAVERM_4395 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sma03016
]
SAVERM_4395 (aspS)
03029 Mitochondrial biogenesis [BR:
sma03029
]
SAVERM_4395 (aspS)
Enzymes [BR:
sma01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
SAVERM_4395 (aspS)
Amino acid related enzymes [BR:
sma01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SAVERM_4395 (aspS)
Transfer RNA biogenesis [BR:
sma03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SAVERM_4395 (aspS)
Prokaryotic type
Other AARSs
SAVERM_4395 (aspS)
Mitochondrial biogenesis [BR:
sma03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SAVERM_4395 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
BAC72107
UniProt:
Q82F68
LinkDB
All DBs
Position
5377024..5378787
Genome browser
AA seq
587 aa
AA seq
DB search
MHRYRSHTCGELRASDVGSDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPAYE
ALDKVSKESTVRVDGKVVSRGTENVNPDLPTGEIEVEVSEVELLGAAAPLPFTINAEDGV
NEERRLEYRFLDLRRERMHRNILLRTAVISAIRHKMTALGFNEMATPILSATSPEGARDF
VVPSRLHPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE
MSFVEQEDVFQPIEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV
DITDIFEGSEFKAFAGKHVRALPVPDVSGQTRKFFDGLGDYAVEQGAKGLAWVRVGEDGS
LTGPIAKFLTEENVAELTKRLSLAPGHAVFFGAGEFDEVSKIMGAVRVEAAKRSGNFEEN
VFRFCWIVDFPMYEKDEDTGKIDFSHNPFSMPQGGLEALETQDPLDILGWQYDIVCNGVE
LSSGAIRNHEPEIMLKAFEIAGYDRDTVEEQFAGMLRAFRFGAPPHGGIAPGVDRIVMLL
ADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELHLSVRKPQPK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggtacaggtcccacacctgcggcgagctccgcgcctctgacgtcggcagcgac
gtccggctgagcggctggctgcacaatcgccgagacctgggtggcatcctcttcatcgat
ctgcgcgaccactacggcatcacgcagctcgtcgcccgccccggcacccccgcctacgag
gccctcgacaaggtctccaaggagtcgacggtccgcgtcgacggcaaggtcgtctcgcgc
ggcacggagaacgtgaacccggacctgccgaccggcgagatcgaggtcgaggtgagcgag
gtcgagctgctcggcgcggccgccccgctcccgttcacgatcaacgccgaggacggggtc
aacgaggagcggcgcctggagtaccgcttcctcgacctgcgccgcgagcgtatgcaccgc
aacatcctgctgcgtacggccgtgatctccgcgatccgtcacaagatgacggcgctgggc
ttcaacgagatggcgaccccgatcctcagcgccacctcccccgagggcgcgcgcgacttc
gtggtgccctcccggctgcacccgggcaagttctacgccctgccgcaggccccgcagcag
ttcaagcagctgctgatgatctccggcttcgaccgctacttccagatcgcgccctgtttc
cgcgacgaggacgcgcgcgcggaccggtcgccgggcgagttctaccagctcgacgtggag
atgtccttcgtcgagcaggaggacgtcttccagccgatcgagaagctgatgacggagctg
ttcgaggagttcggtggtggccgtcacgtcacctctcccttcccgcgcatcccgttccgc
gaggcgatgctgaagtacggctcggacaagccggacctgcgggcccagctggagctcgtc
gacatcaccgacatcttcgagggctcggagttcaaggcgttcgccggcaagcacgtacgc
gcgctgccggtgccggacgtgtccggtcagacgcggaagttcttcgacggtctcggtgac
tacgcggtcgagcagggcgcgaagggcctggcctgggtgcgcgtcggcgaggacggttcg
ctgaccggcccgatcgccaagttcctcaccgaggagaacgtcgccgagctgaccaagcgc
ctctccctggcccccggccacgccgtcttcttcggcgcgggcgagttcgacgaggtctcg
aagatcatgggcgcggtgcgggtcgaggccgcgaagcgctcgggcaacttcgaggagaac
gtcttccggttctgctggatcgtcgacttcccgatgtacgagaaggacgaggacaccggg
aagatcgacttctcgcacaacccgttctcgatgccgcagggcggtctggaggccctggag
acccaggacccgctggacatcctcggctggcagtacgacatcgtctgcaacggtgtcgag
ctgtcctccggcgcgatccggaaccacgagcccgagatcatgctcaaggccttcgagatc
gcgggctacgaccgggacaccgtcgaggagcagttcgcgggcatgctccgcgcgttccgc
ttcggcgccccgccgcacggcggcatcgccccgggcgtggaccgcatcgtcatgctgctg
gccgacgagccgaacatccgcgagacgatcgccttcccgctcaacggcaacgcccaggac
ctgatgatgggcgcgccgacggagctggacgagacccgcctgcgcgagctgcacctttcg
gtacggaagccgcagccgaagtag
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