Streptomyces avermitilis: SAVERM_4592
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Entry
SAVERM_4592 CDS
T00126
Name
(GenBank) putative transcriptional regulator with cyclic nucleotide-binding domain
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
sma
Streptomyces avermitilis
Pathway
sma02020
Two-component system
sma02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAVERM_4592
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAVERM_4592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sma03000
]
SAVERM_4592
Transcription factors [BR:
sma03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
SAVERM_4592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HVO_A0261_N
Crp
MarR_2
GntR
Sigma70_r4
Xre-like-HTH
Sigma70_r4_2
HTH_ParB
HTH_3
HTH_24
YfeC-like
Motif
Other DBs
NCBI-ProteinID:
BAC72304
UniProt:
Q82EM2
LinkDB
All DBs
Position
complement(5606198..5606872)
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AA seq
224 aa
AA seq
DB search
MDDVLRRAPLFAALDDEQAAELRASMSEVTLARGDALFHEGDPGDRLYVVTEGKVKLHRT
SPDGRENMLAVLGPGELIGELSLFDPGPRTATATALTEVKLLGLGHGDLQPWLNVRPEVA
AALLRAVARRLRKTNDQMSDLVFSDVPGRVARALLDLSRRFGVQSEEGIHVVHDLTQEEL
AQLVGASRETVNKALADFAGRGWLRLEARAVILLDVERLAKRSR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacgttctgcggcgcgccccgctcttcgcggcgctcgatgacgagcaggccgcg
gagctccgcgcctccatgagtgaggtgaccctcgcgcgcggcgacgccctgttccatgag
ggcgaccccggtgaccggctgtatgtggtcaccgagggcaaggtcaagctccaccgcaca
tcccccgacggccgcgagaacatgctcgccgtcctcggccccggcgagctgatcggcgag
ctgtcgctgttcgacccgggtccgcgcacggccacggccaccgcgctgaccgaggtcaag
ctgctcggcctcggccacggcgacctccagccctggctgaacgtgcgccccgaggtggcc
gccgccctgctgcgcgccgtcgcccggcgcctgcgcaagaccaacgaccagatgtccgac
ctggtcttctcggacgtgcccggccgggtcgcgcgcgccctgctcgacctctcacgccgc
ttcggcgtgcagtccgaggaaggcatccacgtggtgcacgacctcacacaggaggagctg
gcccagctggtcggcgcgtcccgcgagacggtcaacaaggccctcgcggacttcgcgggc
cgcggctggctgcgcctggaggcgcgcgccgtgatcctgctggacgtggagcgcctcgcg
aagcgctcgcgctga
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