Streptomyces avermitilis: SAVERM_4613
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Entry
SAVERM_4613 CDS
T00126
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
sma
Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
SAVERM_4613
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
LRR_RPS2
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAC72325
UniProt:
Q82EK1
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All DBs
Position
complement(5629010..5631517)
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AA seq
835 aa
AA seq
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MAFNHLPAGVHDALGPLSVMPVTHSLPMAKNHRPDRSSSDTASSPSPGTVLDRLASGPSR
ASRITHTEHLPPREGRHAVWPDRIRSEVIAAVQAAGIEHPWAHQARAAEHALDGESVVVA
TGTASGKSLAYLVPALSALLDGSEAPNGRGATALYLAPTKALAADQCRSVKELSQPLGTA
VRPAVYDGDTPVEEREWVRQYANYVLTNPDMLHRGILPAHPRWSSFLRALRYVVIDECHT
YRGVFGSHVAQVLRRLRRLCARYGASPVFLLASATAAEPSVAASRLTGLRVVEVADDASP
RGELVFALWEPPLTELHGEKGAPVRRTATAETADLLTDLTLQGVRSVAFVRSRRGAELIA
VIAQERLAEIDRSLARRVAAYRGGYLPEERRALERALHSGELLGLAATTALELGVDVSGL
DAVVIAGYPGTRASLWQQAGRAGRSGQGALAILVARDDPLDTFLVHHPEALFDQPVESTV
LDPDNPYVLAPHLCAAAEELPLVEEDLALFGPSTADLLPQLEAAKLLRRRTKAWHWTRRE
RAADLTDIRGEGGRPVQIVEAGTGRLLGTVDAGAAHTTVHEGAVHLHQGRTYLVRELDLE
DSVALVEEANPSYSTVARDTTAISVLETDVEVPWGEGRLCYGSVEVTNQVVSFLRRRLIT
GEVLGETKLDLPPRTLRTRAVWWTVTEDQLDAARITPEILGGALHAAEHASIGMLPLFAT
CDRWDIGGVSVPLHPDTLLPTVFVYDGHPGGAGFAERAFHTARDWLTATRQAIASCECDA
GCPSCIQSPKCGNGNDPLHKRGAVRLLSVLLRGAAEQEKAGLPKEPARAAESSAD
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcattcaatcacttaccggcaggcgtgcacgacgccttgggtccattgtccgtcatg
ccagtgacacactcgttgccgatggccaagaatcaccgacccgatcgatcctcgtcggac
accgcatccagcccctcgccgggcacggtcctggaccggctcgcctcggggccgagccga
gcttcgcgcatcactcatacggagcacttgcccccgcgtgagggtcgccatgccgtgtgg
cccgaccggatccgttcggaggtcatcgccgcggtgcaggccgcgggcatcgaacacccc
tgggcccaccaggcacgggcggccgagcacgccctggacggcgagtcggtggtcgtcgcc
acaggcaccgcctccggcaagtccctggcgtacctcgtaccggccctgtcggccctcctg
gacggctccgaggcccccaatgggcgtggcgcgacggccctgtacctcgccccgacgaag
gccctggcagcggatcagtgccgctctgtgaaggaactttcacaacctctgggcaccgcc
gtgcgccccgcggtctacgacggcgacacgcccgtcgaggaacgcgaatgggtacgtcag
tacgccaactacgtcctgaccaaccccgacatgctgcaccgcggcatattgcccgcacac
ccgcgctggtcctccttcctgcgtgccctgcgctatgtcgtcatcgacgagtgccacacc
taccggggcgtcttcggctcccacgtcgcccaggtactgcgccgattgcgccgtctgtgc
gcgcggtacggcgcgtcgccggtgttcctgctggcctccgccaccgccgccgagccctcg
gtcgccgcgtcccgtctcacgggcctgcgggtcgtggaggtcgcggacgacgcctcccca
cggggggaactggtgttcgccctctgggagcccccgctcaccgagctgcacggcgagaag
ggcgcgcccgtccgccgcaccgccaccgccgagaccgccgacctcctgaccgacctgacc
ctgcaaggcgtgcgctcggtcgccttcgtacgctcccggcgtggcgccgagctgatcgcg
gtgatcgcccaggaacgcctcgccgagatcgaccgctcactcgcccggcgagtggccgcc
taccgcggcggctacctaccggaggaacgccgcgccctcgaacgcgccctgcactccggc
gaactcctcggcctcgccgccaccaccgccctcgaactcggcgtcgacgtgtcggggctg
gacgccgtcgtcatcgccggctacccggggactcgggcatccctctggcagcaggccggc
cgcgccggacgctcggggcagggggcgctggcgatcctggtcgcgcgcgacgacccgctg
gacacgttcctcgtccaccaccccgaggccctgttcgaccagccggtggagtccacggtc
ctcgaccccgacaacccgtacgtcctcgcgccgcacctgtgcgctgcggccgaggaactg
cctttggtggaagaggacctggcactgttcggcccgtccaccgcagacctgctgccacag
ctggaggccgcgaagctgctgcgccgccgcaccaaggcgtggcactggacacgccgggag
cgagccgcggacctcacggacatccgcggggagggcgggcggcccgtgcagatcgtcgag
gccggcaccgggcggctgctcggcacggtcgacgcgggcgccgcgcacaccaccgtgcac
gagggcgcggtccatctgcaccagggccgtacctacctggtgcgtgagctggacctggag
gattccgtcgccctggtcgaggaggccaatccgtcgtattcgacggtcgcccgggacacg
accgccatctcggtcctggagacggacgtcgaagttccctggggcgaaggccggttgtgc
tacggctccgtcgaggtcaccaaccaagtcgtctccttcctgcgtcgcagactcatcacc
ggcgaagtgctcggcgagaccaaactcgaccttccgccacgtacgctccgcactcgcgcc
gtgtggtggacggtcaccgaggatcagctggacgcggcgcggatcaccccggagatcctc
ggcggcgccctgcacgccgccgagcacgcgtcgatcggcatgctcccgctgttcgccacg
tgcgaccgctgggacatcggcggcgtctcggtcccactgcacccggacacgctcctgccg
acggtcttcgtctacgacggccatccgggtggcgcgggattcgcggagcgcgccttccac
acggcccgcgactggctcaccgccacccgccaggccatcgcatcctgcgagtgcgacgcc
ggctgcccgtcctgcatccagtcccccaagtgcggcaacggaaacgatccgctccacaaa
cggggggccgtgcggctgctgtcggtgctgttgcgaggggcggcggagcaggagaaggcg
ggtctgccgaaggagcccgcacgggcggcggaatcgtccgcggactaa
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