Streptomyces avermitilis: SAVERM_4955
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Entry
SAVERM_4955 CDS
T00126
Symbol
truA
Name
(GenBank) putative pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sma
Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sma03016
]
SAVERM_4955 (truA)
Enzymes [BR:
sma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SAVERM_4955 (truA)
Transfer RNA biogenesis [BR:
sma03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAVERM_4955 (truA)
Prokaryotic type
SAVERM_4955 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BAC72667
UniProt:
Q82DM1
LinkDB
All DBs
Position
6003707..6004564
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AA seq
285 aa
AA seq
DB search
MSDEVQPGFVRVRLDLSYDGTEFSGWAKQAAGRRTVQGEIEDALRTVTRSGETTYELTVA
GRTDAGVHARGQVAHVDLPGELWAEHQEKLLKRLAGRLPKDVRVWSLTEAPSGFNARFSA
IWRRYAYRVTDNTGGVDPLLRSHVLWHDWPLDVDAMNEAARRLVGEHDFAAYCKKREGAT
TIRTLQELSLVRGDDGVITATVCADAFCHNMVRSLIGALLFVGDGHRGPDWPGKVLAVGV
RDSAVHVVRPHGLTLEEVGYPADELLAARNKEARNKRTLPAAGCC
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatgaagtacagcccgggttcgtacgggtgcggctggacctgtcgtacgacggg
accgagttctcggggtgggccaagcaggccgcggggcgccggaccgtacagggcgagatc
gaggatgcgctgcggacggtgacgcggtcgggcgagaccacgtacgagctgaccgtcgcc
ggacgcaccgacgccggtgtgcacgcgcgggggcaggtggcgcatgtcgatctgcccggg
gagctgtgggccgagcatcaggagaagctgctcaagcggctcgcggggcgactgcccaag
gatgtgcgggtgtggtcgctgaccgaggcgcccagcgggttcaacgcgcggttctcggcc
atctggcggcgctacgcctaccgcgtcaccgacaacaccggcggcgtcgacccccttctg
cgcagtcacgtcctctggcacgactggccgctcgacgtcgacgccatgaacgaggccgcc
cgacggctcgtcggggagcacgacttcgccgcctactgcaagaagcgcgagggcgcgacc
accatccgtacgctccaggagctgagcctcgtgcgcggcgacgacggggtcatcaccgcc
accgtgtgcgccgacgcgttctgccacaacatggtgcgctcgctgatcggggcgctgctg
ttcgtgggggacgggcaccgcgggcccgactggccggggaaggtgctcgccgtgggtgtg
cgcgactcggccgtgcatgtcgtacggccgcacgggctgacgctcgaagaagtcggctac
cccgccgacgagctgctggccgcgcgcaacaaagaggcacggaacaagcggacactgccc
gcggcggggtgctgctga
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