Streptomyces avermitilis: SAVERM_4992
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Entry
SAVERM_4992 CDS
T00126
Symbol
groEL1
Name
(GenBank) putative class I heat-shock protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sma
Streptomyces avermitilis
Pathway
sma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAVERM_4992 (groEL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sma03019
]
SAVERM_4992 (groEL1)
03110 Chaperones and folding catalysts [BR:
sma03110
]
SAVERM_4992 (groEL1)
03029 Mitochondrial biogenesis [BR:
sma03029
]
SAVERM_4992 (groEL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sma04147
]
SAVERM_4992 (groEL1)
Enzymes [BR:
sma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SAVERM_4992 (groEL1)
Messenger RNA biogenesis [BR:
sma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SAVERM_4992 (groEL1)
Chaperones and folding catalysts [BR:
sma03110
]
Heat shock proteins
HSP60 / Chaperonin
SAVERM_4992 (groEL1)
Mitochondrial biogenesis [BR:
sma03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SAVERM_4992 (groEL1)
Exosome [BR:
sma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SAVERM_4992 (groEL1)
Exosomal proteins of other body fluids (saliva and urine)
SAVERM_4992 (groEL1)
Exosomal proteins of breast cancer cells
SAVERM_4992 (groEL1)
Exosomal proteins of colorectal cancer cells
SAVERM_4992 (groEL1)
Exosomal proteins of bladder cancer cells
SAVERM_4992 (groEL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAC72704
UniProt:
Q82DI5
LinkDB
All DBs
Position
6040941..6042569
Genome browser
AA seq
542 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
VEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKNVAAGASPALLKKGID
AAVKAVSEELLATARPIDEKSDIAAVAGLSAQDSQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLEDPYILIHQGKISSIQDLLPLLEKVIQ
ANASKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDIATLTGGQV
IAEEVGLKLDQVGLDVLGTARRVTVTKDDTTIVDGGGSSDEVAGRINQIKAEIENTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLEGNLGKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVAELDKGQGFNA
ATGEYGDLVKSGVIDPVKVTRSALENAASIASLLLTTETLVVEKPAEEEADAGHGHGHGH
SH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggtgtcaccatcgcccgcgaggtcgag
gtcgaggacccgtacgagaacctcggcgcccagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggtacgaccaccgccaccgtgctggcccaggcgctcgtccgc
gagggcctgaagaacgtcgccgccggcgcgtcccccgccctcctgaagaagggcatcgac
gccgcggtcaaggctgtgtccgaggagctcctcgcgaccgcccgcccgatcgacgagaag
tccgacatcgccgccgtcgccggtctgtccgcccaggacagccaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctggacttcaccgagggcatggccttcgacaagggctacctgtcgccg
tacttcgtgacggaccaggagcgcatggaggccgtcctcgaggacccgtacatcctcatc
caccagggcaagatctcctccatccaggacctcctgccgctgctggagaaggtcatccag
gccaacgcctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggcactgtcg
accctggtcgtgaacaagatccgcggcacgttcaacgcggtcgcggtcaaggcccccggc
ttcggtgaccgccgcaaggccatgctcggcgacatcgccaccctcaccggcggtcaggtc
atcgccgaggaggtcggcctcaagctcgaccaggtcggcctggacgtgctgggcaccgcc
cgccgcgtgaccgtcaccaaggacgacaccaccatcgtcgacggtggcggcagctccgac
gaggtcgccggccggatcaaccagatcaaggccgagatcgagaacaccgactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtcatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctcgtc
cacgccgtgaaggtcctggagggcaacctcggcaagaccggcgacgaggccacgggtgtc
gcggtcgtccgccgcgccgccgtcgagccgctgcgctggatcgccgagaacgccggcctc
gagggctacgtcatcacctccaaggtcgccgagctcgacaagggccagggcttcaacgcc
gcgaccggcgagtacggcgacctggtcaagtccggtgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcgtccatcgcgtccctgctcctgacgaccgagaccctg
gtcgtcgagaagccggcggaagaggaggccgacgcgggccacggccacggtcacggccac
tcgcactga
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integrated database retrieval system
