Streptomyces avermitilis: SAVERM_5016
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Entry
SAVERM_5016 CDS
T00126
Symbol
gabD1
Name
(GenBank) putative succinate-semialdehyde dehydrogenase, NADP-dependent
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sma
Streptomyces avermitilis
Pathway
sma00250
Alanine, aspartate and glutamate metabolism
sma00310
Lysine degradation
sma00350
Tyrosine metabolism
sma00650
Butanoate metabolism
sma00760
Nicotinate and nicotinamide metabolism
sma01100
Metabolic pathways
sma01120
Microbial metabolism in diverse environments
Module
sma_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SAVERM_5016 (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SAVERM_5016 (gabD1)
00310 Lysine degradation
SAVERM_5016 (gabD1)
00350 Tyrosine metabolism
SAVERM_5016 (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SAVERM_5016 (gabD1)
Enzymes [BR:
sma01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SAVERM_5016 (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SAVERM_5016 (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SAVERM_5016 (gabD1)
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Motif
Pfam:
Aldedh
DUF1487
DUF6459
Motif
Other DBs
NCBI-ProteinID:
BAC72728
UniProt:
Q82DG6
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Position
6072117..6073748
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AA seq
543 aa
AA seq
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MTDSQAPEKTGTDDTTGTNPLAPAPAGARTAADVVTPELVAQLTKGVVGSGRTANHTPFT
GEKLADLPESTPEDVATAFERARAAQIAWGATPVRQRAAVLLRFHDLVLARQAEVLDLIQ
LETGKARLHAHEEVQAVAVAARHYGRKAPAYLKPKRHAGAMPTLTRVTELRHPRGVVGQI
APWNYPLELSVGDALPAFVAGNALVMKPDTETCLTALWARDLLIEAGLPAEVFQVVIGEG
PVVGPEVVKHADYVSFTGSTRTGREVAQGAAARLVGVSLELGGKNAMLVLEDADIDKAAA
GAVRACFSSAGQLCISIERLYVHESVADAFAERFAARTRAMRLGTSLAYGADMGSLVGER
QLETVTRHVDEAVAKGAKLLAGGVARPDIGPYFYEPTILDGVEAPMSVCTEETFGPVVSL
YRFKTEDEAVELANSTPYGLNASVWTKDGRRGRAVAARLRTGTVNVNDGYAPAYGSVQSP
MGGMKDSGLGRRHGSEGILKYTEAQTVAHQRLLPMAPSLGMDDEKYAEFMSRSLKAMKAL
RLR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgacggactcgcaggccccggaaaagaccggcaccgacgacacgaccggcaccaatccc
ctcgctcccgcccccgcgggcgcccgtaccgccgccgacgtggtcacgccggagctggtc
gcccagctcaccaagggagtggtcggctccggccgtaccgccaaccacacgccgttcacc
ggcgaaaagctggccgacctgcccgagtccacccccgaggacgtcgcgaccgccttcgag
cgggcccgtgccgcgcagatcgcctggggcgcgacgcccgtacggcagcgcgccgccgtc
ctcctgcgcttccacgacctggtgctggcccggcaggccgaggtcctcgacctcatccag
ctggagacgggcaaggcccggctgcacgcccacgaagaggtgcaggccgtcgcggtcgcc
gcccggcactacggccgcaaggcgcccgcgtacctgaagcccaagcggcacgccggtgcc
atgccgacgctcacgcgcgtcaccgaactccgccacccgcggggggtcgtgggccagatc
gccccttggaactacccgctggagctgtcggtcggcgacgcgctgcccgccttcgtcgcg
ggcaacgccctcgtcatgaagcccgacaccgagacctgcctcaccgccctgtgggcgcgc
gacctgctcatcgaggccgggctgcccgccgaggtcttccaggtcgtcatcggcgaaggc
ccggtcgtggggcccgaggtggtcaagcacgccgactacgtctccttcaccggctccacc
cgcaccggccgcgaggtcgcccagggcgcggccgcccggctcgtcggcgtctccctcgaa
ctcggcggcaagaacgccatgctggtcctggaggacgccgacatcgacaaggcggccgcc
ggcgccgtccgcgcctgcttctcctccgccgggcaactgtgcatctccatcgagcggctg
tacgtccacgagtccgtcgccgacgcgttcgcggagcgcttcgccgcccggaccagggcg
atgcggctcggcacgtccctcgcgtacggcgccgacatgggctcgctggtcggcgagcgc
cagctggagaccgtgacccggcatgtcgacgaggccgtcgcgaagggcgcgaagctcctc
gcgggcggcgtcgcgcgcccggacatcggcccctacttctacgagcccaccatcctcgac
ggtgtcgaggccccgatgtccgtgtgcaccgaggagaccttcggcccggtcgtctccctc
taccgcttcaagaccgaggacgaggcggtcgaactcgccaactccacgccgtacggcctc
aacgcgtccgtctggacgaaggacggccggcgcggacgcgcggtcgcggcccgcctgcgc
accggcacggtcaacgtcaacgacggctacgcgcccgcgtacggcagcgtccagtcgccg
atgggcggcatgaaggactccggcctcggccgccgccacggctccgaaggcatcctcaag
tacaccgaggcgcagaccgtcgcccaccagcggctgctgccgatggcgccgtcgctcggc
atggacgacgagaagtacgcggagttcatgagccgcagcctcaaggcgatgaaggcgctc
cggctgcgctag
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