Streptomyces avermitilis: SAVERM_5127
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Entry
SAVERM_5127 CDS
T00126
Symbol
hup
Name
(GenBank) putative DNA-binding protein Hu 1
KO
K03530
DNA-binding protein HU-beta
Organism
sma
Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sma03032
]
SAVERM_5127 (hup)
03036 Chromosome and associated proteins [BR:
sma03036
]
SAVERM_5127 (hup)
03400 DNA repair and recombination proteins [BR:
sma03400
]
SAVERM_5127 (hup)
DNA replication proteins [BR:
sma03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SAVERM_5127 (hup)
Chromosome and associated proteins [BR:
sma03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SAVERM_5127 (hup)
DNA repair and recombination proteins [BR:
sma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SAVERM_5127 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Urease_beta
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
BAC72839
UniProt:
Q82D57
LinkDB
All DBs
Position
6227508..6227789
Genome browser
AA seq
93 aa
AA seq
DB search
MNRSELVAALADRAEVTRKDADAVLAAFAETVGEIVAKGDEKVTIPGFLTFERTHRAART
ARNPQTGDPIQIPAGYSVKVSAGSKLKEAAKGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcagtgagctggtggccgcgctggccgaccgcgccgaggtgacccgcaaggac
gccgacgccgttctggccgcgttcgccgagaccgtcggcgagatcgttgccaagggcgac
gagaaggtcaccatccccggcttcctgaccttcgagcgcacccaccgtgccgctcgcacc
gcgcgtaacccgcagaccggcgacccgatccagatcccggcgggctacagcgtcaaggtc
tccgcgggctcgaagctcaaggaagccgccaagggcaagtaa
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integrated database retrieval system
