Streptomyces avermitilis: SAVERM_5237
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Entry
SAVERM_5237 CDS
T00126
Name
(GenBank) putative sensory box/GGDEF family protein
Organism
sma
Streptomyces avermitilis
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_9
PAS
PAS_3
PAS_8
Diguanyl_cycl_sensor
PAS_7
Motif
Other DBs
NCBI-ProteinID:
BAC72949
UniProt:
Q82CV1
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Position
complement(6345466..6347328)
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AA seq
620 aa
AA seq
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MSGTSEGPAPTADLIRPAVTERHIDTPPRTTTTSASPSSTGAAFAAAPLAMAVVDREGLV
VTANETLGTLLGTDADALAGKTAADLVDLSSDPRAWHAYREVLRGRQARLRCTRRLKHPD
GRSFWVQVTVSPLPEEERAILLSVADISAGRELQARLRHLQMHDPVTRLPNRTLFFERLS
AALEAEAYEESGTGRIGLCYLDLDGFKAVNDTLGHRIGDRLLAAVAERLTRCAEEAGYAR
PSAPLVARLGGDEFALLVEDSTGTDQLADLAESVLKALQAPFDLSGQRLSVSASIGVVER
HAAGTTATGLMQAADTTLYWAKADGKSRWTLFDPERNAHRMTRQALSSGLRPAIEHGEFV
LEYQPLVGMEDGRLRGVEALVRWNHPQFGMLTPNRFIGLAEEDGSIVQLGRWVLATACRQ
ARRWQLEHPDAPPLFVSVNVAVRQVWDSDLVTDVAEILAETGLAPHLLQLELTESAVMGS
AGRPLQALQALSDMGVHIAIDDFGTGYSNLAYLSRLPVSVLKLDGSFVRGFQYDTSEKHD
GTDARPNPADEVVVEAMIQLAHRLGLTVTAECVETSAQASRLRGIGCDTGQGWLYSRPVA
PDRISELLRTPARRSRSEPI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggaacgtccgaagggccggcgcccacggcagacctcatccggccggccgtcaca
gagcgtcacatcgacacacctcctcgtacgaccacgaccagcgcgtccccctcctccacc
ggcgccgccttcgccgcggcccccctcgccatggcggtcgtcgaccgcgaggggctcgtc
gtcacggccaacgagacgctgggcacgctgctgggcaccgacgcggacgcgctggccggg
aagaccgccgccgacctggtggacctctcctccgacccccgcgcctggcacgcgtaccgc
gaagtgctgcgcggccggcaggcccggctgcgctgcacccgccggctcaagcaccccgac
gggcgctcgttctgggtccaggtgacggtctccccgctgcccgaggaggagcgggcgata
ctgctgtcggtcgccgacatcagcgccggccgtgaactccaggcgcggctgcggcacttg
cagatgcacgacccggtgacccgcctgcccaaccgcacgctgttcttcgaacgcctgtcg
gccgcactggaggcggaggcgtacgaggagagtggcaccggccgcatcgggctgtgctat
ctggacctcgacggcttcaaggcggtcaacgacacgctcggccaccggatcggcgaccgg
ctgctcgccgccgtcgccgaacggctgacgcgctgcgcggaagaggcgggatacgccagg
ccgagcgccccgctggtggcccgactcggcggcgacgagttcgcgctgctcgtggaggac
tcgacgggcaccgaccaactcgccgacctggccgagtcggtgctgaaggcgctccaggcc
cccttcgacctctccggccagcgactgtcggtctccgcgtcgatcggcgtggtggagcgg
cacgcggcgggcaccaccgccaccggtctgatgcaggccgccgacacgacgctgtactgg
gctaaggccgacggcaagtcccgctggacgctcttcgacccggagcgcaacgcacaccgt
atgacccgccaggccctctcctccggtctgcgtccggcgatcgagcacggtgaattcgta
ctggagtaccagccgttggtgggcatggaggacggccgcctccgcggggtcgaagccctc
gtccgctggaaccatccgcagttcgggatgctgacgccgaatcggttcatcggactggcc
gaggaggacggctcgatcgtgcagctcggccgctgggtgctggcgaccgcctgccggcag
gcccgccgctggcagctggaacacccggacgcaccgccgctgttcgtcagcgtgaacgtg
gccgtgcgccaggtgtgggactccgacctggtcacggacgtggcggagatcctcgcggag
acgggcctggccccgcacctcctccagctggagctcacggaatcggccgtcatgggctcg
gccggccgcccgctccaggccctccaggcgctcagcgacatgggcgtgcacatcgcgatc
gacgacttcggtacgggctactcgaacctggcctatctcagccggctaccggtctcggtg
ctgaagctggacggctccttcgtacgcggcttccagtacgacacctccgagaagcacgac
gggaccgacgcccgcccgaacccggccgacgaggtcgtcgtcgaggccatgatccagctc
gcccaccggctggggctgacggtcacggccgagtgcgtggagacctcggcccaggcgtcc
cgtctgcgcggcatcggctgcgacaccggccagggctggctgtactcccgtccggtggcg
ccggatcgtatctccgaactgctgcggacaccggcccgccggagcagatccgaaccgatc
tga
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