Streptomyces avermitilis: SAVERM_5318
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Entry
SAVERM_5318 CDS
T00126
Symbol
rbsB2
Name
(GenBank) putative D-ribose ABC transporter substrate-binding protein/permease protein
KO
K10439
ribose transport system substrate-binding protein
K10440
ribose transport system permease protein
Organism
sma
Streptomyces avermitilis
Pathway
sma02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAVERM_5318 (rbsB2)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SAVERM_5318 (rbsB2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sma02000
]
SAVERM_5318 (rbsB2)
Transporters [BR:
sma02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
SAVERM_5318 (rbsB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
BPD_transp_2
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
BAC73030
UniProt:
Q82CM6
LinkDB
All DBs
Position
complement(6444518..6446464)
Genome browser
AA seq
648 aa
AA seq
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MATDTLKSTTGASGASAVRRLLLDNGALTALIVLVVAMSALSGDFLTTDNLLNIGVQAAV
TAILAFGVTFVIVSAGIDLSVGSVAALSATVLAWTATSHGLPVVVAVALAVATGVACGLV
NGFLISYGKLPPFIATLAMLSVGRGLSLVISQGSPIPFPDSVSHLGDTLGGWLPVPVLVM
IVMGLITALILGRTYIGRSMYAIGGNEEAARLSGLRVKKQKLAIYALSGLFAAAAGIVLA
SRLSSAQPQAAQGYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLSVSA
FWQQVVIGVVIALAVLLDTLRRKAGATPVAGASSGGKGKQAMTYVIAAVVAAAVVGAMSF
LHNGSSASPTQKMGLSLSTLNNPFFVQIKTGAQEEAKKQGADLTVTDAQNDASQQANQVQ
NFTSSGVGSIIVNPVDSDAAGPAVRSANKADIPVVGVDRGVNKADTAALVASDNVAGGRL
GAKALAEKLGGKGRIVILQGLAGTSASRERGAGFAEGLKAYPGIKVVARQPADFDRTKGL
DVMTNLLQAHPDVQGVFAENDEMALGAIKALGAKAGKSVSVVGFDGTPDGLTAVKSGTLY
ASVAQQPKELGRIAVQNALRAAEGKKVDKTVKVPVKVVTAKNVAAFGG
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
gtggccactgacacgctcaagagcacaacgggcgcgagtggcgcctcggcggtccgccgg
ctcctgctcgacaacggggcgctcaccgcgctcatcgtcctcgtcgtcgcgatgtcggcg
ctgtccggcgacttcctgacgacggacaacctgctcaacatcggcgtccaggcggccgtg
accgccatcctcgccttcggtgtgaccttcgtgatcgtctcggcgggcatcgacctgtcg
gtcggttcggtcgcggcgctctcggccaccgtccttgcctggacggcgacttcgcacggc
ctgccggtcgtggtcgccgtggccctcgcggtcgccaccggcgtagcgtgcggtctcgtc
aacggcttcctgatctcgtacgggaaactaccgccgttcatcgcgacgctcgccatgctg
tcggtgggccgcggtctgtcgctggtgatctcgcagggcagcccgatccccttccccgac
tcggtctcgcacctcggtgacacgctcggcggctggctgccggtgcccgtcctggtgatg
atcgtgatgggtctgatcaccgccctgatcctcggccgtacgtacatcgggcgctccatg
tacgcgatcggcggcaacgaggaggccgcgcgcctgtcgggcctgcgggtgaagaagcag
aagctcgcgatctacgcgctgtcgggtctgttcgcggccgccgcgggcatcgtgctcgcc
tcccggctctcctccgcgcagccgcaggccgcacaggggtacgagctggacgcgatcgcc
gcggtcgtcatcggcggcgcctcgctcgcgggcggtacgggcaaggcgtccgggacgctg
atcggcgcgctgatcctggcggtgctgcgcaacgggctgaatctgctgtccgtgtccgcg
ttctggcagcaggtcgtcatcggtgtcgtgatcgcgctggcggtgctcctcgacacgctg
cgccgcaaggccggggcgactccggtggccggtgcctcgagtggcggcaagggcaagcag
gcgatgacgtatgtgatcgcggccgtggtcgcggcggccgtcgtgggggcgatgtccttc
ctgcacaacggctcgtcggcttcgccgacgcagaagatgggcctgtccctctcgaccctc
aacaaccccttcttcgtacagatcaagacgggtgcgcaggaggaggcgaagaagcagggc
gccgacctgacggtcacggacgcgcagaacgacgcctcgcagcaggccaaccaggtgcag
aacttcaccagctcgggcgtcggttcgatcatcgtcaacccggtggactcggacgcggcg
ggcccggcggtgcgctccgccaacaaggccgacattcccgtcgtgggcgtcgaccggggc
gtcaacaaggcggacacggccgcgctggtcgcctccgacaacgtcgcgggcggcaggctg
ggcgccaaggcgctggccgagaagctgggcggcaagggcaggatcgtgatcctccagggt
ctggccggcacctccgccagccgtgagcgcggggcgggcttcgccgagggcctgaaggcc
taccccggcatcaaggtcgtcgcccggcagcccgcggacttcgaccgcaccaaggggctc
gacgtcatgacgaacctgctccaggcgcacccggacgtccagggcgtcttcgccgagaac
gacgagatggcgctcggcgcgatcaaggcgctgggtgccaaggccggaaagtcggtctcg
gtcgtgggcttcgacggcacgccggatgggctgacggcggtcaagtcgggcacgctgtac
gcgtccgtggcgcagcagccgaaggagctgggccggatcgcggtgcagaacgcgctgcgg
gcggccgagggcaagaaggtcgacaagacggtgaaggtgccggtgaaggtggtcacggcg
aagaacgtggcggccttcggcggctga
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integrated database retrieval system
