Streptomyces avermitilis: SAVERM_5562
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Entry
SAVERM_5562 CDS
T00126
Symbol
fadD12
Name
(GenBank) putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sma
Streptomyces avermitilis
Pathway
sma00061
Fatty acid biosynthesis
sma00071
Fatty acid degradation
sma01100
Metabolic pathways
sma01212
Fatty acid metabolism
sma02024
Quorum sensing
sma04146
Peroxisome
Module
sma_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SAVERM_5562 (fadD12)
00071 Fatty acid degradation
SAVERM_5562 (fadD12)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SAVERM_5562 (fadD12)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAVERM_5562 (fadD12)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sma01004
]
SAVERM_5562 (fadD12)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sma04147
]
SAVERM_5562 (fadD12)
Enzymes [BR:
sma01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SAVERM_5562 (fadD12)
Lipid biosynthesis proteins [BR:
sma01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SAVERM_5562 (fadD12)
Exosome [BR:
sma04147
]
Exosomal proteins
Exosomal proteins of breast milk
SAVERM_5562 (fadD12)
Exosomal proteins of breast cancer cells
SAVERM_5562 (fadD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAC73274
UniProt:
Q82BZ2
LinkDB
All DBs
Position
6727208..6729118
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AA seq
636 aa
AA seq
DB search
MSDTQTLIENRPPSVAALFLERVAATPDAEAYRYPVPSPKLSASPEQGGAPAGQGPDDWK
SLSWAQAAERVFAVAAGLIELGVQPEQRVALASSTRVEWILADLGIMCAGAATTTIYPQT
NADESAFILADSESKVLIAEDAAQLAKAVEKRAELPALTHVVVIDPTGVESSDWVLTLAE
LEARGAAHLEKNPDLIKEKVGAITSDQLATLIYTSGTTGRPKGVRLPHDNWSYMAKATAG
TGLISADDVQYLWLPLAHVFGKVLTSGQIEVGHVTAVDGRVDKIIENLPVVQPTYMAAVP
RIFEKVYNGVAAKARAGGGAKYKIFQWAAEVAREYAKVSQDNFRRTGAASVPFGLGAKYK
VADALVFAKIREAFGGNLRACVSGSAALAPEIGYFFAGAGIHILEGYGLTESSAASFVNP
GEAYRTGTVGKPLPGTEVRIADDGEILLRGPGIMEGYHGLPEKTAEVLEPDGWFHTGDIG
ELSPDGYLRITDRKKDLIKTSGGKYIAPAEVEGQFKGVCPYVSNILVHGADRNFCTALIA
LDEPSILEWAKENGLAGKSYADVVAAPATVALVEGYVTELNGGLQRWQTIKKFRLLPRDL
DIEHGEITPSLKLKRPVVEREYKHLIDEMYAGSREA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacacacagaccctgatcgagaaccgtccgccgtccgtggcggccctcttcctg
gagcgcgtggcggccacgccggacgccgaggcctaccgctacccggtaccgtcccccaag
ctctcggcttcgcccgagcagggaggcgcccccgcgggccagggcccggacgactggaag
tcgctgagctgggcgcaggccgccgaacgggtcttcgcggtggcggccggcctcatcgag
ctgggtgtgcagccggagcagcgagtggccctcgcctcctcgacgcgggtcgagtggatc
ctggccgacctgggcatcatgtgcgccggcgcggccacgaccacgatctacccgcagacc
aacgccgacgagtccgcgttcatcctcgccgactccgagagcaaggtgctgatcgcggag
gacgcggcgcagctcgcgaaggcggtggagaagcgcgccgagcttcccgcgctgacccat
gtcgtggtgatcgaccccacgggcgtggagagcagtgactgggttctcacccttgccgag
ctggaggcccgcggcgccgcccacctggagaagaaccccgacctgatcaaggagaaggtc
ggcgcgatcacctccgaccagctcgccaccctcatctacacctccggcaccacgggccgc
cccaagggtgtccggctcccgcacgacaactggtcgtacatggcgaaggccaccgccggg
accggtctgatcagcgcggacgacgtgcagtacctgtggctgccgctcgcgcacgtcttc
ggcaaggtgctcacgtccgggcagatcgaggtcgggcatgtcaccgccgtcgacggccgc
gtcgacaagatcatcgagaatctgccggtggtgcagccgacgtacatggctgccgtaccg
cgcatcttcgagaaggtctacaacggggtcgctgccaaggcgcgggcgggtggcggcgcc
aagtacaagatcttccagtgggcggccgaggtcgcccgcgagtacgccaaggtcagccag
gacaacttccgccgtaccggcgcggcctccgtgccgttcgggctcggcgccaagtacaag
gtcgcggacgcgctcgtcttcgccaagatccgcgaggccttcggcggcaacctgcgcgcg
tgcgtctcgggcagtgccgcgctcgcgcccgagatcggctacttcttcgccggcgccggc
atccacatcctggaggggtacggcctcacggagtcctccgcggcctccttcgtgaacccc
ggcgaggcgtaccgcaccggcacggtcggcaagccgctgcccggcaccgaggtgcggatc
gcggacgacggcgagatcctgctgcgcggccccggcatcatggaggggtaccacgggctg
ccggagaagaccgccgaggtgctggagccggacggctggttccacaccggcgacatcggc
gagctgtcccccgacggctatctgcgcatcacggaccgcaagaaggacctcatcaagacc
tcgggcggcaagtacatcgcgcccgccgaggtcgagggccagttcaagggtgtgtgcccg
tacgtctccaacatcctggtgcacggcgccgaccggaacttctgcacggccctcatcgcc
ctcgacgagccgtccatcctggagtgggccaaggagaacggcctggccggcaagtcgtac
gccgacgtggtcgccgcgcccgcgacggtcgccctggtcgagggctacgtcacggaactg
aacggtggcctccagcgctggcagaccatcaagaagttccgcctcctgccgcgcgacctc
gacatcgaacacggcgagatcaccccgagcctcaagctgaagcgcccggtcgtcgaacgc
gagtacaagcatctgatcgacgagatgtacgcggggtcgcgggaggcttag
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