Streptomyces avermitilis: SAVERM_5628
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Entry
SAVERM_5628 CDS
T00126
Symbol
recO
Name
(GenBank) putative DNA recombination and repair protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sma
Streptomyces avermitilis
Pathway
sma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAVERM_5628 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sma03400
]
SAVERM_5628 (recO)
DNA repair and recombination proteins [BR:
sma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAVERM_5628 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SAVERM_5628 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
ArfGap
Motif
Other DBs
NCBI-ProteinID:
BAC73340
UniProt:
Q82BS6
LinkDB
All DBs
Position
6805871..6806626
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AA seq
251 aa
AA seq
DB search
MGLMSLFRDDGIVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHV
DVQFFSRGSELIGRGLPLCTQSETIAPYGGAIVTDYARYTAGTAMLETAERFTDHEGEPA
VQQYLLLVGGLRTLARGEHEPHLVLDAFLLRSLAVNGYAPSFSNCAKCGMPGPNRFFSVA
AGGSVCVDCRVPGSVVPSAQALVLLGALLTGDWETADACEPRYVREGSGLVSAYLHWHLE
RGLRSLRYVEK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcatgagtctgttccgcgacgacggcatcgtgctgcgcacccagaagctgggt
gaggcggaccggatcatcaccttgctcacgcgtggtcacggacgcgtacgcgccgtggcg
cgcggtgtgcggcggaccaagtcgaagttcggggcgcggctggagccgttctcccacgtg
gacgtgcagttcttctcgcgcgggagcgagctgatcgggcgcggcctgcccctgtgcaca
cagagcgagaccatcgctccgtacggtggcgccatcgtgacggactacgcgcggtacacc
gccgggacggccatgctcgagaccgccgagcggttcaccgatcacgagggggagcccgcc
gtgcagcagtatctgctgctggtcggcgggctgcgcacgctcgcccggggggaacacgaa
ccccacctcgtgctcgacgccttcctgctgcgctccctcgccgtgaacgggtacgcgccc
agcttcagcaactgcgcgaagtgcggaatgccggggccgaaccggttcttctcggtggcc
gcgggcggctccgtctgcgtcgactgccgggtgcccggcagcgtcgtaccctcggcgcag
gcgctggtgctgctcggcgcgctgctgacgggagactgggagaccgcggacgcctgtgag
ccgcggtacgtccgggagggcagcggcctggtgtcggcctatctgcactggcacctggag
cgcggcctgcgctccctgcgttacgtcgagaagtag
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integrated database retrieval system
