Streptomyces avermitilis: SAVERM_6227
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Entry
SAVERM_6227 CDS
T00126
Symbol
polA1
Name
(GenBank) putative DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sma
Streptomyces avermitilis
Pathway
sma03030
DNA replication
sma03410
Base excision repair
sma03420
Nucleotide excision repair
sma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAVERM_6227 (polA1)
03410 Base excision repair
SAVERM_6227 (polA1)
03420 Nucleotide excision repair
SAVERM_6227 (polA1)
03440 Homologous recombination
SAVERM_6227 (polA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sma03032
]
SAVERM_6227 (polA1)
03400 DNA repair and recombination proteins [BR:
sma03400
]
SAVERM_6227 (polA1)
Enzymes [BR:
sma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAVERM_6227 (polA1)
DNA replication proteins [BR:
sma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SAVERM_6227 (polA1)
DNA repair and recombination proteins [BR:
sma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SAVERM_6227 (polA1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAVERM_6227 (polA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BAC73938
UniProt:
Q82A32
LinkDB
All DBs
Position
7481798..7484521
Genome browser
AA seq
907 aa
AA seq
DB search
MAETASKKTEKTSGGARPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEAPTHFAVAFDVSRKTWRSEEFTEYKANRSKTPDEFKGQVELIGELLDAMHAQRF
AVDGFEADDIIATLATQAEAEGFEVLIVTGDRDSFQLVSDHTTVLYPTKGVSELTRFTPE
KVFEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELVERVDEVKG
KVGQNLRDHLESVKLNRRLTEMVRDVELPKSVAALERAPYDRTAVAMVLDTLEIRNPSLR
ERLLAVDPGGEEAEEAPVAAGVAVDGAVLGAGELKPWLAEHGTTVLGLATVDSWALGAGA
VAEVALAAADGAAAWFDPSQLDEADENAFATWLADPAKPKVLHNAKGVMRVFAEHGWTVE
GVSMDTALAAYLVKPGRRSFALDALSLEYLGRELEPAATADGQLAFGADEGAEADALMVQ
ARAILDLGEAFGERLKEVGSADLLRDMELPTSALLARLERHGIAADKAHLEAMEQMFAGA
VQQAVKEAHAAAGHEFNLGSPKQLQEVLFGELGLPKTKKTKTGYTTDADALAWLAAQTDN
ELPVIMLRHREQAKLRVTVEGLIKTIAADGRIHTTFNQTVAATGRLSSTDPNLQNIPVRT
DEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLIEAFTSGEDLHTTVASQVF
GVERSAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIDAGEARALMDTYFERFGGVRDYL
RRAVDEARATGYTETLFGRRRYLPDLNSDNRQRRETAERMALNAPIQGTAADIVKIAMLN
VDRALQEANLKSRMLLQVHDEIVLEIAPGERAKTEELVRREMASAVQLRAPLDVSVGDGG
DWESAAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaaacagcatcgaagaagaccgagaagacctccggcggcgcgcgtccgcggctg
atgctcatggacgggcactcgctggcgtaccgcgcgttcttcgcgctgcccgcggagaac
ttcacgaccgcgaccggccagccgacgaacgcgatctacggcttcgcgtcgatgctggcg
aacacgctgcgcgacgaggcgcccacgcacttcgcggtggcgttcgacgtctcgcgcaag
acgtggcgctccgaggagttcacggagtacaaggcgaaccgctccaagaccccggacgag
ttcaaggggcaggtcgagctgatcggtgagctgctcgacgcgatgcacgcgcagcggttc
gcggtcgacggcttcgaggcggacgacatcatcgccacgctcgccacgcaggccgaggcc
gagggcttcgaggtcctcatcgtcaccggtgaccgggactccttccagctggtcagcgat
cacacgacggtgctgtatccgacgaagggcgtctcggagctgacccggttcaccccggag
aaggtcttcgagaagtacgggttgacgcccgcgcagtacccggacttcgcggcgctgcgc
ggcgacccgtccgacaacctgccgggcatcccgggcgtcggcgagaagaccgcggccaag
tggatcaaccagttcggttcgttcgcggagctggtcgagcgcgtcgacgaggtcaagggc
aaggtcggccagaacctccgcgaccacctggagtcggtgaagctgaaccgccggctcacg
gagatggtgcgggacgtcgagctgccgaagtcggtcgccgccctggagcgcgctccgtac
gaccgcacggccgtcgcgatggtcctggacaccctggagatccgcaacccgtccctgcgc
gagcggctgctggccgtcgacccgggcggggaggaggccgaggaggcgccggtcgccgcg
ggcgtcgcggtggacggcgcggtgctgggcgcgggcgagctgaagccgtggctcgccgag
cacggcacgacggtcctggggctggccacggtcgactcctgggcgctcggcgcgggtgcg
gtggccgaggtcgcgctcgccgcggccgacggggcggccgcctggttcgacccgtcccag
ctggacgaggccgacgagaacgcgttcgcgacgtggctcgccgaccccgcgaagcccaag
gtgctgcacaacgccaagggtgtgatgcgggtcttcgccgagcacggctggaccgtcgag
ggcgtgtccatggacaccgcgctcgccgcctacctggtcaagccgggccgccgctccttc
gcgctggacgcgctgtccctggagtacctcggccgtgagctggagcccgccgcgacggcc
gacgggcagctggccttcggcgcggacgagggggccgaggccgacgcgctgatggtgcag
gcgcgcgcgatcctcgacctgggcgaggcgttcggcgagcggttgaaggaggtcggctcg
gccgacctgctccgcgacatggagctgccgacgtccgccctgctggcccggctggagcgg
cacggcatcgcggcggacaaggcccacctggaggccatggagcagatgttcgcgggcgcc
gtgcagcaggcggtgaaggaggcgcacgcggccgcgggacacgagttcaacctgggctcg
cccaagcagctccaggaagtcctcttcggtgaactgggcctgcccaagacgaagaagacg
aagacgggctacacgacggacgcggacgcgctggcgtggctggccgcccagacggacaac
gaactgccggtgatcatgctccgtcaccgtgagcaggcgaagctgcgggtgacggtcgag
ggcctgatcaagacgatcgcggcggacggccgcatccacaccacgttcaaccagacggtg
gcggcgaccggtcggctgtcgtcgaccgacccgaaccttcagaacatcccggtgcgcacc
gacgagggccgcgcgatccgccgcggcttcgtggtcggcgagggcttcgagtcgctgatg
accgcggactacagccagatcgagctgcgtgtgatggcccacctgtccgaggacgagggc
ctgatcgaggcgttcacctccggagaggacctgcacacgacggtcgcctcccaggtgttc
ggggtggagcgctcagcggtggacgcggagatgcgccgcaagatcaaggcgatgtcgtac
ggcctcgcgtacggcctgtcggccttcggtctctcgcagcagctgaacatcgatgcgggc
gaggcgcgggcgctgatggacacgtacttcgagcgcttcggaggagtacgcgactatctg
cgccgcgcggtcgacgaggcgcgggcgacgggctacacggagacgctgttcggccgccgc
cgctacctcccggacctgaacagcgacaaccgccagcgccgcgagacggcggagcgcatg
gcgttgaacgcgccgatccagggcaccgcggcggacatcgtcaagatcgccatgctgaac
gtggaccgcgcgctccaggaggcgaacctcaagtcccgcatgctcctccaggtccacgac
gaaatcgtcctggagatcgcgccgggcgagcgggcgaagacggaggaactggtccgccgg
gagatggcgtccgccgtgcagctgagggctccgctggatgtctcggtgggcgacggcggg
gactgggagtcggcggcgcactag
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