Streptomyces avermitilis: SAVERM_6286
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Entry
SAVERM_6286 CDS
T00126
Symbol
uvrA1
Name
(GenBank) putative excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sma
Streptomyces avermitilis
Pathway
sma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAVERM_6286 (uvrA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sma03400
]
SAVERM_6286 (uvrA1)
DNA repair and recombination proteins [BR:
sma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAVERM_6286 (uvrA1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAVERM_6286 (uvrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
nSTAND1
AAA_16
AAA_33
AAA_25
AAA_22
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
BAC73997
UniProt:
Q829X3
LinkDB
All DBs
Position
7543816..7546845
Genome browser
AA seq
1009 aa
AA seq
DB search
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECGRPISRQSPQAIVDKVLELPEGSRFQVLSPLVRERKGEFVDLFADLQTKGYSRARV
DGQTIQLSDPPTLKKQEKHTIEVVIDRLTVKEGAKRRLTDSVETALGLAGGMVVLDFVDL
PEDDPERERMYSEHLYCPYDDLSFEELEPRSFSFNSPFGACPDCSGIGTRMEVDAELIVP
DEEKSLDEGAIHPWSHGHTKDYFGRLIGALADALGFRTDIPFAGLPQRAKKALLYGHKTQ
IEVRYRNRYGRERVYTTPFEGAVPFVKRRHSEAESDASRERFEGYMREVPCPTCQGTRLK
PLVLAVTVMEKSIAEVAAMSISDCADFLGKLKLNARDKKIAERVLKEVNERLRFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DMGNTLIVVEHDEDTIKVADWIVDIGPGAGEHGGKVVHSGSLKELLANAESQTGQYLSGK
KSIPLPDIRRPRDPSRQLTVHGARENNLQDIDVSFPLGVLTAVTGVSGSGKSTLVNDILY
THLARELNGARSVPGRHTRVDGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLFA
ETTEAKVRGYLPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKSIADVLNMPIEEAMHFFEAVPAIARHLNTLNDVGLGYVRLGQSATTLSGGEAQ
RVKLASELQRRSTGRTVYVLDEPTTGLHFEDISKLLVVLSGLVDKGNTVIVIEHNLDVIK
TADWVVDMGPEGGAGGGLVVAEGTPEEVAGVPTSHTGKFLREILDADRISDAASVKAPRK
TAARKTAAAKSTTKKTATVRTTNNTATKKAAAVTKKTAPAKKTTRARKA
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctcatcgtccgtggcgcgcgcgagcacaacctcaagaatgtctcgctc
gacctgccacgcgactcgctcatcgtcttcacgggcctgtctgggtcgggcaagtcctcg
ctggccttcgacacgatcttcgccgaggggcagcgccgctacgtcgagtcgctctcgtcg
tacgcccggcagttcctcggccagatggacaagccggacgtggacttcatcgagggcctc
tccccggcggtctccatcgaccagaagtcgacctcgcgcaacccgcgctcgacggtcggc
accatcacagaggtttacgactatctgcgtctgctgttcgcgcgcatcggcaagccgcac
tgccccgagtgcggccgcccgatctcgcgccagtcgccgcaggccatcgtcgacaaggtc
ctggagctgccggagggcagccgcttccaggtcctgtcgcccctggtgcgcgaacgcaag
ggagagttcgtcgacctgttcgccgatctccagaccaagggatacagccgtgcccgggtc
gacggccagacgatccagctcagcgacccgcccacgctgaagaagcaggagaagcacacc
atcgaggtggtcatcgaccgcctcacggtgaaggaaggcgccaagcgccgcctcacggac
tccgtggagaccgccctcggcctggccggtggcatggtcgtgctcgacttcgtcgacctc
cccgaggacgaccccgagcgcgagcgcatgtactcggagcacctgtactgcccgtacgac
gacctgtccttcgaggagctggagccccgctccttctccttcaactcgccgttcggcgcc
tgccccgactgctccggcatcggtacgcgcatggaggtcgacgccgagctgatcgtcccg
gacgaggagaagtccctcgacgagggcgccatccacccctggtcgcacggacacaccaag
gactacttcggccggctgatcggggccctcgcggacgcgttgggattccggaccgacatc
cccttcgccggtctcccgcagcgcgccaagaaggcactgctttacggccacaagacccag
atcgaggtccgctaccgcaaccggtacgggcgcgagcgtgtgtacaccacgcccttcgaa
ggggccgtccccttcgtcaagcggcggcacagcgaggccgagagcgacgcgagccgcgag
cgcttcgagggctatatgcgcgaggtcccctgtcccacctgccagggcacgcgtctgaag
ccgctcgtcctcgcggtcacggtcatggagaagtcgatcgccgaggtcgcggcgatgtcc
atcagcgactgcgcggacttcctgggcaagctgaagctcaacgcccgcgacaagaagatc
gccgaacgcgtcctgaaggaggtcaacgagcggctgcgcttcctggtcgacgtcggcctc
gactacctgtcgctgaaccgcgcggccggcaccctgtccggcggcgaggcccagcgcatc
cgcctggccacgcagatcggctccggcctcgtcggcgtcctgtacgtcctcgacgagccg
tccatcggtctgcaccagcgcgacaaccaccggctgatcgagaccctggtccggctgcgc
gacatgggcaacacgctcatcgtcgtggagcacgacgaggacaccatcaaggtcgccgac
tggatcgtcgacatcggccccggtgcgggcgagcacggcggcaaggtcgtgcacagtggc
tccctgaaggagctgctggccaacgccgagtcgcagaccggccagtacctgtccggcaag
aagtccatccccctgcccgacatccgacgcccgcgcgacccgtcccggcagctcacggtg
cacggcgcccgtgagaacaacctccaggacatcgacgtgtcgttcccgctgggcgtcctc
actgccgtcacgggcgtgtccggctccggcaagtcgacgctggtcaacgacatcctgtac
acacacctggcccgcgagctgaacggcgcgaggagcgtccccggccgacacacgcgcgtg
gacggcgacgacctcgtcgacaaggtggtgcacgtcgaccagtcgcccatcggccgcacc
ccccggtccaacccggccacgtacaccggagtcttcgaccacgtccgcaagctgttcgcg
gagacgaccgaggcgaaggtgcgcggctatctgcccggacgcttctccttcaacgtcaag
ggcggtcgctgtgagaactgctccggtgacggcaccatcaagatcgagatgaacttcctg
ccggacgtgtacgtcccgtgcgaggtctgccacggagcgcgctacaaccgggagaccctg
gaggtccactacaagggcaagtccatcgccgacgtcctgaacatgccgatcgaggaggcc
atgcacttcttcgaggccgtcccggcgatcgcccgccatctgaacacgctgaacgacgtc
ggcctcggctacgtccgcctcggccagtccgcgacgaccctgtccggcggcgaggcgcag
cgcgtgaagctggccagcgagctccagcggaggtccaccggaagaacggtgtacgtcctc
gacgagccgaccaccggtctccacttcgaggacatcagcaagctcctcgtcgtgctctcc
gggctggtcgacaagggcaacacggtcatcgtcatcgagcacaacctcgacgtcatcaag
accgcggactgggtcgtcgacatgggccccgagggcggcgccggcggcggtctcgtcgtc
gccgagggcacgccggaggaggtcgccggggtgccgacgagccacaccggcaagttcctg
cgcgagattctcgacgccgatcgcatcagcgacgcggcgtccgtgaaggccccgcgcaag
acggccgccaggaagacggcagcggccaagtcgacgacgaagaagacggcgacggtcagg
accaccaacaacacggccaccaagaaggcggccgccgtgacgaagaagaccgcccccgcg
aagaagaccacgcgggcgcgcaaggcctga
DBGET
integrated database retrieval system
