Streptomyces avermitilis: SAVERM_6987
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Entry
SAVERM_6987 CDS
T00126
Symbol
gcvP
Name
(GenBank) putative glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sma
Streptomyces avermitilis
Pathway
sma00260
Glycine, serine and threonine metabolism
sma00630
Glyoxylate and dicarboxylate metabolism
sma00670
One carbon pool by folate
sma00785
Lipoic acid metabolism
sma01100
Metabolic pathways
sma01110
Biosynthesis of secondary metabolites
sma01200
Carbon metabolism
Module
sma_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SAVERM_6987 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAVERM_6987 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SAVERM_6987 (gcvP)
00670 One carbon pool by folate
SAVERM_6987 (gcvP)
Enzymes [BR:
sma01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
SAVERM_6987 (gcvP)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
SepSecS
Motif
Other DBs
NCBI-ProteinID:
BAC74698
UniProt:
Q827D7
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Position
8345154..8348117
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AA seq
987 aa
AA seq
DB search
MTEGEAVGVPAQGCPSKVASDQEASAMTAHRIPLSDLEQGIPFEQRHIGPDSEARAKMLA
QVGYGSLDELTATAVPDVIKNAEALELPGARTEAEVLAELRSLADRNQVLGSMIGLGYYG
TFTPPVILRNVMENPAWYTAYTPYQPEISQGRLEALLNFQTVVAELTGLPTSGASLLDEG
TAAAEAMALSRRMGKNKKGLFLVDADALPQTIAVIETRAEPTGVEVVVADLSEGIPAGIA
EREINGVLIQYPGASGAVRDIKPLVEQAHELGAVVTVAADLLALTLLTSPGELGADIAVG
TTQRFGVPMGFGGPHAGYMAVREKFARSLPGRLVGVSVDADGHKAYRLALQTREQHIRRE
KATSNICTAQVLLAVMAGMYAVYHGPDGLRTIARRTHRYATILAEGLKAGGVEVVHGAYF
DTLTARVPGRAAEIVAAAREGGVNLHLVDADLVSISCDETTTRAQLGAVWTAFGVEGDIE
ALDAAAEDTLPAALLRTDDYLTHPVFHQYRSETAMLRYLRRLSDRDYALDRGMIPLGSCT
MKLNATTEMEPVTWPEFGQLHPFAPAEQAQGYLTLIRELEERLAEVTGYDKVSLQPNAGS
QGELAGLLAVRGYHRANGDEQRTVCLIPSSAHGTNAASAVMAGMKVVVVKTADDGEIDVE
DLRAKIEQYRDELSVLMITYPSTHGVFEEHVADICAQVHEAGGQVYVDGANLNALVGLAK
PGHFGGDVSHLNLHKTFCIPHGGGGPGVGPVGVRAHLAPYLPNHPLQPEAGPATGVGPIS
AAPWGSAGILPISWSYVRLMGGEGLKRATQVAVLSANYIAKRLEPHYPVLYTGPGGLVAH
ECIIDLRPLTKATGVSVDDIAKRLIDYGFHAPTMSFPVAGTLMIEPTESEDLGELDRFCE
AMIAIRAEVEKVGSGEWPAEDNPLRNAPHTAAALGGEWEHAYSREEAVFPAGVSAADKYW
PPVRRIDQAFGDRNLVCSCPPLDAYDD
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgacagagggggaggccgtcggggtacccgcgcaggggtgcccctcgaaggtcgcgtca
gaccaggaggcctccgcaatgaccgcccatcgcattccgctctccgatctcgaacaggga
atccccttcgagcagcgccacatcggccccgattccgaagcccgggccaagatgctcgcc
caggtcggctacgggtcgctcgacgagctgaccgcgaccgccgtcccggacgtcatcaag
aacgccgaggcgctggagctgccgggcgcgcgcaccgaggccgaggtgcttgccgaactg
cgctccctcgccgaccgcaaccaggtcctcggttccatgatcggcctcggctactacggc
accttcacaccgccggtgatcctccggaacgtgatggagaacccggcctggtacaccgcg
tacacgccgtaccagccggagatctcgcagggccggctggaggcgctgctgaacttccag
accgtcgtcgccgagctgaccgggctgccgacctccggcgcctcgctgctcgacgagggc
accgcggccgcggaggccatggcgctgtcccggcggatgggcaagaacaagaagggcctg
ttcctggtcgacgcggacgcgctgccgcagaccatcgccgtcatcgagacccgtgccgag
ccgaccggcgtcgaggtcgtcgtcgccgacctgagcgaaggcatccccgccgggatcgcc
gagcgcgagatcaacggcgtgctgatccagtacccgggcgcctccggtgccgtacgcgac
atcaagccgctcgtcgagcaggcgcacgagctgggcgcggtcgtcaccgtcgccgccgat
ctgctcgcgctcacgctgctcacctcgccgggtgagctgggtgccgacatcgcggtcggt
acgacgcagcggttcggtgtgccgatgggcttcggcgggccgcacgccggttacatggcc
gtgcgtgagaagttcgcgcgcagcctgcccggccggctcgtgggcgtgtccgtggacgcc
gacgggcacaaggcgtaccggctcgccctgcagacgcgggagcagcacatccgccgcgag
aaggcgaccagcaacatctgtacggcccaggtgctgctcgccgtgatggccggcatgtac
gccgtgtaccacgggcccgacggactgaggacgatcgcgcggcgtacgcaccggtacgcc
acgatcctcgccgaagggctgaaggccggcggcgtcgaggtcgtgcacggcgcgtacttc
gacacgctgaccgcgcgggtgccgggccgggccgccgagatcgtcgccgccgcgcgtgag
ggcggggtcaacctgcacctcgtcgacgcggacctcgtgtcgatctcctgtgacgagacc
accacgcgggcccaactgggcgccgtctggaccgcgttcggcgtcgagggcgacatcgag
gcgttggacgcggcggccgaggacacactgccggccgcgctcctgcgtaccgacgactac
ctgacccacccggtcttccaccagtaccgttccgagaccgcgatgctgcgctacctgcgc
aggctctccgaccgcgactacgcgctcgaccgcggcatgatcccgctgggctcctgcacc
atgaagctcaacgcgaccaccgagatggagccggtcacctggcccgagttcgggcagctg
caccccttcgcgcccgccgagcaggcgcagggctacctcacgctcatccgggaactggag
gagcggctcgccgaggtcaccggctacgacaaggtgtcgctccagccgaacgccggctcc
cagggcgagctggccgggctgctcgccgtacgtgggtaccaccgcgccaatggcgacgag
cagcgcacggtctgcctgatcccgtcctccgcgcacggcacgaacgcggcgagcgccgtg
atggccggcatgaaggtcgtcgtggtgaagacggccgacgacggtgagatcgacgtcgag
gacctgcgcgccaagatcgagcagtaccgcgacgagctgtcggtgctgatgatcacgtac
ccctcgacgcacggtgtgttcgaggagcacgtcgccgacatctgcgcccaggtgcacgag
gcgggcggccaggtgtacgtcgacggagccaacctcaacgcgctggtcgggctcgccaag
ccgggccacttcggcggtgacgtctcgcacctcaacctgcacaagacgttctgcatcccg
cacggcgggggcggtccgggcgtcgggccggtcggtgtgcgcgcccacctggcgccgtat
ctgccgaaccacccgctccagcccgaggccggccccgcgacgggcgtcggcccgatctcg
gccgcgccctggggctccgcgggcatcctgcccatctcctggtcgtacgtccggctgatg
ggcggcgagggcctcaagcgcgccacgcaggtggcggtgctgtccgccaactacatcgcc
aagcggctggagccgcactacccggtgctctacaccggtcctggcgggctcgtcgcgcac
gagtgcatcatcgatctgcgtccgctgaccaaggcgaccggcgtgagtgtcgacgacatc
gccaagcggctgatcgactacggcttccacgcgccgacgatgtcgttcccggtggcgggg
acgctgatgatcgagccgaccgagtccgaggacctgggcgagctcgaccggttctgcgag
gccatgatcgccattcgtgcggaggtcgagaaggtcggctcgggcgagtggccggcggag
gacaacccgctgcggaacgcgccgcacaccgcggccgcgctcggcggagagtgggagcac
gcctacagccgtgaggaggccgtcttcccggcgggtgtctcggccgcggacaagtactgg
ccgccggtgcgccgtatcgaccaggccttcggcgaccgcaacctggtctgctcctgcccg
ccgctggacgcttacgacgactga
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