Streptomyces avermitilis: SAVERM_7055
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Entry
SAVERM_7055 CDS
T00126
Symbol
sbcD
Name
(GenBank) putative ATP-dependent dsDNA exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sma
Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sma03400
]
SAVERM_7055 (sbcD)
DNA repair and recombination proteins [BR:
sma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAVERM_7055 (sbcD)
Archaeal homologous recombinant proteins
SAVERM_7055 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
BAC74766
UniProt:
Q826X0
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All DBs
Position
8413967..8415130
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AA seq
387 aa
AA seq
DB search
MRILHTSDWHLGRAFHRVNMLGAQAGFIGHLVTTVRERGVDAVVVSGDVYDRAVPPLAAV
ELFDDALHRLADLGVPTVMISGNHDSARRLGVGAGLIGRAGIHLRTEVSACGTPVLLSDT
FGDVAFYGLPYLEPALVRDQFGVEKAAHEAVLAAAMDRVRADLATRPPGTRSVVLAHAFV
TGGEASDSERDITVGGVAAVPAGVFDGVDYAALGHLHGSQTITERVRYSGSPLPYSFSEA
EHRKSMWLVDLGADGSIEAERVDCPVPRPLARIRGPLEELLADPGLTRHEEAWVEATLTD
PVRPAEPMARLTERFPHTLSLVFDPERAPEDPDVSYARRLAGRSDQQIAEDFVAHVRGAG
PDAREQAVLQDAFDAVRADEAVREVAR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
ttgaggattctgcacacgtccgactggcatctgggccgggcgttccaccgggtgaacatg
ctcggtgcccaggccggtttcatcggccatctcgtcacgaccgtgcgtgagcgcggcgtg
gacgcggtggtcgtgtcgggggacgtgtacgaccgggcggtgccgccgctggccgcggtc
gagctcttcgacgacgccctgcaccggctggcggacctgggcgtgcccacggtgatgatc
tccgggaaccacgactcggcgcgccgactgggcgtgggcgccggcctcatcggccgcgcc
ggcatccatctgcggaccgaggtctcggcgtgcggtacgcccgtgctgctgtccgacacc
ttcggcgacgtcgcgttctacgggctgccgtatcttgaaccggccctggtgagggaccag
ttcggggtggagaaagcggcccacgaggccgtgctcgccgccgccatggaccgggtccgg
gccgacctcgccacgcgcccgccgggcacccgttccgtcgtcctcgcccatgccttcgtc
accggcggcgaggccagtgacagtgagcgggacatcacggtcggcggggtggccgccgtg
cccgccggggtcttcgacggcgtcgactacgcggcgctgggacatctgcacggcagccag
accatcaccgagcgcgtgcgctactcgggctccccgctgccctactccttctccgaggcc
gagcaccgcaagagcatgtggctcgtggacctgggggccgacggctcgatcgaggcggag
cgggtcgactgcccggtgccccgcccgctcgccaggatccgtgggccactggaggaactg
ctcgccgaccccgggctgacgcgccacgaggaggcgtgggtcgaggccacgctcaccgac
ccggtgcgccccgccgagcccatggcgcgactgaccgagcgtttcccgcacacgctcagc
ctcgtcttcgacccggagcgggcaccggaggacccggacgtctcgtacgcgcggcgcctg
gctggccgcagcgaccagcagatcgcggaggacttcgtggcccatgtgcgcggcgccgga
cccgacgcgcgcgaacaggccgtgctgcaggacgcgttcgacgccgtccgcgccgacgag
gcggtccgggaggtcgcccgctga
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