Streptomyces avermitilis: SAVERM_7159
Help
Entry
SAVERM_7159 CDS
T00126
Symbol
gabD3
Name
(GenBank) putative succinate-semialdehyde dehydrogenase, NADP-dependent
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sma
Streptomyces avermitilis
Pathway
sma00250
Alanine, aspartate and glutamate metabolism
sma00310
Lysine degradation
sma00350
Tyrosine metabolism
sma00650
Butanoate metabolism
sma00760
Nicotinate and nicotinamide metabolism
sma01100
Metabolic pathways
sma01120
Microbial metabolism in diverse environments
Module
sma_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SAVERM_7159 (gabD3)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SAVERM_7159 (gabD3)
00310 Lysine degradation
SAVERM_7159 (gabD3)
00350 Tyrosine metabolism
SAVERM_7159 (gabD3)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SAVERM_7159 (gabD3)
Enzymes [BR:
sma01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SAVERM_7159 (gabD3)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SAVERM_7159 (gabD3)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SAVERM_7159 (gabD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
BAC74870
UniProt:
Q826M3
LinkDB
All DBs
Position
complement(8519323..8520771)
Genome browser
AA seq
482 aa
AA seq
DB search
MSILNDVPKQLFIGGTWADAADGATMPVDDPATGEILCHVADAGPKDARLAADAAVEAQD
GWARTAPRERSEILRRAYEIIVSRTGELALLMTSEMGKPLAEARGEVAYAAEFFRWFSEE
AVRIDGGYGVLPDGRNRMLLMRRPVGPCLLVTPWNFPLAMGTRKIGPAIAAGCTMVLKPA
PQTPLSSLALAGILKEAGLPDGVLNVVTTSRAGEVVEPLLTGGRIRKLSFTGSTRVGRLL
LAQCADAVVRTSMELGGNAPFIVLDDADLSAAVDGAMTAKMRNMGEACTAANRFFVHRSV
ADEFGRRLAERMGALVVGPGTRDGVDVGPLIDEAGRAKVEELVADAVERGARVLVGGVAP
DGPGRFYPPTVLADVDPGSRLMETEIFGPVAAILVFDDEDEVVRRANDTPWGLVGYVFTQ
GLDRALRVSERLEVGMVGVNTGLVSNPAAPFGGVKQSGLGREGGRVGIEEFLEYKYLAVP
LR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatcctcaacgacgtgcccaagcagttgttcatcggcggtacctgggcggacgcg
gccgacggcgccaccatgccggtggacgaccccgcgaccggcgagatcctctgccacgtc
gccgacgccggacccaaggacgcccggctcgcggcggacgccgccgtcgaggcacaggac
ggctgggcccgtacggcgccccgcgaacgcagcgagatcctgcgccgcgcgtacgagatc
atcgtctcccgcaccggcgaactcgccctgctgatgaccagcgagatgggcaagccgctg
gccgaggcccggggtgaagtggcctacgcggccgagttcttccgctggttctcggaggag
gcggtacggatcgacggcggctacggcgtcctgccggacggccgcaaccgcatgctgctg
atgcgccgtcccgtcgggccgtgtctgctggtcacgccgtggaacttcccgttggcgatg
ggcacccgcaagatcggcccggcgatcgcggcgggctgcacgatggtgctcaagccggcc
ccgcagactccgctgtccagcctcgcgctggccgggatcctgaaggaggcgggcctgccg
gacggcgtactcaacgtcgtcaccacctcccgggccggggaggtcgtggaaccgttgctg
accggcggacgcatccgcaagctgtccttcaccgggtccacccgggtcgggcggctgctg
ctcgcgcagtgcgccgacgcggtcgtacgcacgtcgatggaactgggcggcaacgccccg
ttcatcgtcctcgacgacgcggacctgagcgcggctgtcgacggggcgatgaccgccaag
atgcgcaacatgggcgaggcctgcaccgccgccaatcgcttcttcgtccaccgctcggtg
gcggacgagttcgggaggcggctcgcggagcggatgggggcgctggtcgtcggtcccggc
acccgggacggcgtggacgtggggccgctgatcgacgaggccggtcgagccaaggtcgag
gagctggtcgccgacgcggtggagcggggcgcccgggtactggtcggcggcgtggcgccg
gacggccccggccgcttctacccgccgaccgtcctggcggacgtcgaccccggcagccgg
ctgatggagacggagatcttcgggccggtggcggcgattctcgtcttcgacgacgaggac
gaggtcgtgcgccgggccaacgacaccccatggggcctggtcggctacgtcttcacgcaa
ggcctggaccgcgccctgcgggtcagcgagcgcctggaggtgggcatggtcggtgtgaac
acggggctggtgtccaaccccgccgcgccgttcggcggcgtcaagcagtccgggctcggc
cgggagggcggccgggtcggcatcgaggagttcctggagtacaagtacctcgcggtgccg
ctccggtga
DBGET
integrated database retrieval system
