Streptomyces avermitilis: SAVERM_7289
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Entry
SAVERM_7289 CDS
T00126
Symbol
mutM2
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sma
Streptomyces avermitilis
Pathway
sma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAVERM_7289 (mutM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sma03400
]
SAVERM_7289 (mutM2)
Enzymes [BR:
sma01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SAVERM_7289 (mutM2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SAVERM_7289 (mutM2)
DNA repair and recombination proteins [BR:
sma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAVERM_7289 (mutM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Zn_ribbon_RRN7
Zn_ribbon_8
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
BAC75000
UniProt:
Q826A4
LinkDB
All DBs
Position
8693625..8694485
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AA seq
286 aa
AA seq
DB search
MPELPEVEALKDFLADHVVGHEVVRVLPVAISVLKTYDPPVTALEGREITAVRRHGKFLD
LEADGLHFVTHLARGGWLHWRDKLPDAPPRPGKGPLALRVALETGEGFDLTEAGTQKRLA
VHVVRDPGDVPGVARLGPDPLADDFDEARFARLLEGERRRIKGALRDQSLIAGVGNAYSD
EILHAAKMSPFKLTSALTAEEIRQLYAALRTTLTEAVERSRGLAAGRLKAEKKTGLRVHG
RTGEPCPVCGDTIREVSFSDSSLQYCPTCQTGGRPLADRRMSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaggtcgaagcgctcaaggacttcctggccgaccatgtcgtcggc
cacgaggtcgtgcgggtgctgcccgtcgcgatcagtgtcctgaagacgtacgaccccccg
gtcaccgcccttgagggccgggagatcacggcggtgcgccggcacggcaagttcctcgac
ctggaggcggacggcctgcacttcgtgacgcacctggcccgcggcggctggctccattgg
cgggacaagctgcccgacgccccgccccgccccggcaagggcccgctggcgctgcgtgtc
gcgctggagacgggagagggcttcgacctgacggaggccggcacacagaagagactggcc
gtccatgtcgtacgggacccgggtgacgtcccgggcgtggcccggctcggcccggacccg
ctcgccgacgacttcgacgaggcgcgcttcgcgcggcttctggagggcgagcggcgccgg
atcaagggcgcgctgcgcgaccagagcctgatcgcgggcgtggggaacgcgtacagcgac
gagatcctgcacgccgcgaagatgtcaccgttcaagctcacctcggccctgaccgccgag
gagatacgacagctgtacgcggcactgcgtacgacgctcaccgaggcggtcgagcgctcc
cgggggctggccgccgggcggctgaaggcggagaagaagaccgggctgcgggtgcacggc
agaacgggggagccctgtccggtgtgcggggacacgatccgcgaggtctccttcagcgac
tcctcgctccagtactgcccgacctgccagaccggcggcagacccctggcggaccggcgg
atgtcacggctgctcaagtag
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