Streptomyces avermitilis: SAVERM_7296
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Entry
SAVERM_7296 CDS
T00126
Symbol
lysS2
Name
(GenBank) putative lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sma
Streptomyces avermitilis
Pathway
sma00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAVERM_7296 (lysS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sma01007
]
SAVERM_7296 (lysS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sma03016
]
SAVERM_7296 (lysS2)
Enzymes [BR:
sma01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SAVERM_7296 (lysS2)
Amino acid related enzymes [BR:
sma01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SAVERM_7296 (lysS2)
Transfer RNA biogenesis [BR:
sma03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SAVERM_7296 (lysS2)
Prokaryotic type
Other AARSs
SAVERM_7296 (lysS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BAC75007
NITE:
SAV7296
UniProt:
Q825Z7
LinkDB
All DBs
Position
8700179..8703460
Genome browser
AA seq
1093 aa
AA seq
DB search
MSATVEAAGPGHATGPTRPSWGGFLSKVPEGFATFFGALGLLCVLLAFIAPLRRLLGPFV
RDLDRFVVPVSANLAYGVFLFLLAAATAARKKVTWWLVVVYLGLVTLDDLLGLALGHYAE
SVVSLIVCSLALALLIAARKEFYAASRRGAAWRALAVLFAGLGVAILVGWGLVELFPGTL
PRDQRLLWAADRVCGGLVSGRRFDGRTPRPVSFLLGLFGALALLNAAATLFRSQRMESAL
HGDEEPRIRALLGAYGADDSLGYFATRRDKAVVFSPSGKAAVTYRVEAGVCLASGDPVGD
REAWPHAIDAWLDVARRHAWAPAVMGASEEGAKAFARSGLGALQLGDEAILNTADFDLDG
RDMRVTRQAVNRVRRTGATCRVRRHSTLSDEEMEEVVGRADAWRDTETERGFSMALDRLG
DPADGDCLLVEALGEDGKLLALLSFVPWGGDGVSLDLMRRDRAAPNGVMEFMVAELCAVA
GRTGIRRISLNFAVFRSVFEEGARIGAGPVLRLWRRLLLFFSRWWQLEALYRSNAKYHPQ
WYPRFICYGDTASLARIGLASGIAEGFVSVPSLRKLWGKGHSKGITEPTTTEGLPSLSAL
GLDKGDETGPGAPGLPEQVRVRLSKLDRLRADGTDPYPVGIPPRTHTLARARGSPAGEQV
TVAGRVMLVRDFGGIVFAVLRDWSGDLQLALTRSGSGPALDRFGKDADIGDHITATGRTG
TSDRGEPTVFVTDWQLTGKCLRPLPDKHRGLADPEAKVRRRYLDLVASPDARAVVRARST
AVQALRQGLLDRGYLEVETPMLQQIHGGANARPFTTHINAYDLDLYLRIAPELYLKRLCV
GGLEKVFEMGRTFRNEGVSYKHNPEFTMLEAYQAFADYDVMLDLTRELIQGAATAAFGGP
VARKNGTEHDISGPWPVKTVYGAISEALGEELDAGTSLEALHRHCDRAGVPYTADDGRGD
VVLEMYERLVEERTGLPTFYKDFPTDVSPLTRQHRADPRLAERWDLVAFGTELGTAYSEL
TDPMEQRRRLTAQSLLAAGGDPEAMELDEDFLDALEYAMPPTGGLGIGVDRLVMFLTGLT
IRETLPFPLVRRR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaccgtggaggccgccggacccgggcacgccaccggcccgacacggccgtcc
tggggcggcttcctcagcaaggtgcccgagggcttcgcgaccttcttcggcgccctcggc
ctcctgtgcgtcctgctggccttcatcgcgccgctgcgccgtctgctgggcccgttcgtg
cgcgacctcgacaggttcgtggtcccggtcagcgccaacctcgcctacggcgtcttcctc
ttcctgctcgccgccgcgaccgccgcccgcaagaaggtcacctggtggctcgtggtcgtc
tacctcggcctggtgaccctcgacgacctgctcggcctcgccctcggccactacgccgag
tcggtcgtctcgctgatcgtgtgctcactcgcgctggcgctgctgatcgcggcccgcaag
gagttctacgcggcctcccggcgcggcgccgcgtggcgggccctcgccgtgctgttcgcc
gggctcggtgtggcgatcctggtcgggtggggcctggtcgaactcttccccggcacgctg
ccgcgcgaccagcggctgctgtgggcggccgaccgggtctgcggcggactggtgtccgga
cgccggttcgacggacgcacaccacgccccgtgtccttcctcctcggcctgttcggcgca
ctcgccctgctcaacgccgccgccaccctcttccgctcccagcgcatggagtcggccctg
cacggcgacgaggagccgcgcatccgcgccctgctcggggcgtacggcgccgacgactcc
ctcggctacttcgccacccgccgggacaaggccgtcgtcttctcgcccagcggcaaggcc
gccgtcacctaccgggtcgaggccggtgtctgcctggccagcggggacccggtcggcgac
cgcgaggcctggccgcacgccatcgacgcctggctcgacgtggcccgccgccacgcctgg
gcgcccgccgtcatgggcgcctcggaagagggcgccaaggcgttcgcccgctccggactc
ggcgcgctccaactgggcgacgaggcgatcctgaacaccgccgacttcgatctcgacggc
cgcgacatgcgggtgaccaggcaggccgtcaaccgcgtgcggcgcaccggcgccacctgc
cgggtacgccggcactccaccctcagcgacgaggagatggaggaggtcgtcggccgggcc
gacgcctggcgggacaccgagaccgaacggggcttctcgatggccctggaccggctcggc
gaccccgcggacggcgactgcctcctcgtcgaggccctgggagaggacggaaaactcctc
gccctgctctccttcgtgccctggggcggggacggcgtctccctcgacctgatgcgccgt
gaccgtgccgcgcccaacggagtgatggagttcatggtcgccgagctgtgtgccgtggcc
ggacggacgggcatacgccggatctcgctgaacttcgcggtgttccgctcggtgttcgag
gagggcgcccgtatcggtgccgggccggtcctgcgtctgtggcgccgactgctgctcttc
ttctcgagatggtggcagctggaggccctgtaccgctccaacgccaagtaccacccgcag
tggtacccgcgcttcatctgctacggcgacaccgcctccctcgcccggatcggactggcg
tcgggcatcgccgagggcttcgtctccgtgccctcgctgcgcaagctgtggggcaagggc
cactccaaggggatcaccgagccgacgacgaccgagggtctgccgtcgctgtcggcgctc
ggcctcgacaagggcgacgagaccgggccgggcgcgccgggactgcccgaacaggtccgg
gtgcgcctgagcaagctcgaccggctgcgcgcggacggcaccgacccctaccccgtgggc
atcccaccgcgcacccacaccctcgcccgggcccgtggctctccggcgggcgagcaggtc
accgtcgcgggccgcgtcatgctcgtacgcgacttcggcggcatcgtcttcgccgtgctg
cgcgactggtcgggtgatctgcagctcgccctcacccgatccgggtccgggcccgcgctc
gaccggttcggcaaggacgccgacatcggcgaccacatcaccgccaccggccggaccggc
accagcgaccgcggcgagccgacggtcttcgtcacggactggcagctcaccggcaaatgc
ctgcgcccgctgcccgacaagcaccgaggcctcgccgaccccgaggccaaggtgcgccgc
cgctatctcgacctggtggcgagccccgacgcccgcgcggtcgtacgggcccgctccacc
gccgtccaggcgctgcgccaggggctcctcgaccgcggctatctggaggtcgagacgccg
atgctccagcagatccacggcggcgcgaacgcccggcccttcaccacccacatcaacgcc
tacgacctcgacctgtatctgcgcatcgcccccgagctctacctgaagcggctgtgcgtc
ggcggtctggagaaggtcttcgaaatggggcgcaccttccgcaacgaaggcgtctcctac
aagcacaaccccgagttcacgatgctggaggcctatcaggcgttcgccgactacgacgtg
atgctcgacctcacccgcgaactgatccagggcgcggccaccgcggccttcgggggaccg
gtcgcccgcaagaacggcaccgagcacgacatctccggaccgtggccggtgaagacggtg
tacggcgcgatctccgaggcactgggggaggagctggacgccgggacgagccttgaggcc
ctgcaccggcactgcgaccgggcgggcgtgccgtacaccgcggacgacggccgtggtgac
gtggtcctggagatgtacgagcggctggtcgaggagaggaccggactgcccaccttctac
aaggacttcccgaccgacgtctccccgctcacccggcagcaccgcgccgatccgcgcctg
gccgaacgctgggacctggtcgccttcggtaccgaactgggcaccgcctactcggagttg
accgacccgatggagcagcgcagacggctgacggcgcagtccctgctggccgccggggga
gaccccgaggcgatggagctggacgaggacttcctcgacgcgctggagtacgcgatgcca
cccaccggcggcctcggcatcggcgtggaccggctcgtcatgttcctcacgggcctcacg
atccgggagaccctgccgttcccactggtacgccgccgctga
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