Streptomyces avermitilis: SAVERM_7323
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Entry
SAVERM_7323 CDS
T00126
Symbol
avsD
Name
(GenBank) putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sma
Streptomyces avermitilis
Pathway
sma00300
Lysine biosynthesis
sma00470
D-Amino acid metabolism
sma01100
Metabolic pathways
sma01110
Biosynthesis of secondary metabolites
sma01120
Microbial metabolism in diverse environments
sma01230
Biosynthesis of amino acids
Module
sma_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAVERM_7323 (avsD)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAVERM_7323 (avsD)
Enzymes [BR:
sma01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SAVERM_7323 (avsD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAC75034
UniProt:
Q825X0
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All DBs
Position
8735813..8737039
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AA seq
408 aa
AA seq
DB search
MTVPTPAVRDRIRTLAPGELPAYVYDLAELRAHAAGVRAALPERVELYYAAKANPEPEIL
AALAPYVDGYEVASGGELAHVAQAVPGRPLAFGGPGKTPDEVAAALAGGVQRFHVESEYE
LHMLAEQARRVTPGTRVAVLPRFNLPVRDGSLAGSALAMGGRPTPFGLDPAQAGTVLRLL
TDGTYPHLELRGVHAHLASGLEAPEQLAVAETVVGWATDMAGEHGVGLGEVNVGGGMTVD
YAAPERRFDWVTYGKGLARLAHAHPELTLRIEPGRALTAYCGWYATEVLDVKRSHGEEFA
VVRGGTHHLRTPATKGHDQPCSVLPVDGWPHPWPRPAAEAERVTLTGQLCTPKDVLARQV
PAGGLRAGDRVAFALAGAYAWNISHHDFLMHPRPGFHFLLPDRGDGEP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacccacgcccgcggtgcgcgaccgcatccggaccctcgcccccggcgaactg
cccgcgtacgtctacgacttggcggagctacgggcacatgccgcaggtgtgcgggcggcg
cttcccgagcgcgtcgagctgtactacgcggccaaggccaacccggagccggagatcctg
gccgcgctcgccccgtacgtcgacggctacgaggtggcctcgggcggcgaactcgcccat
gtcgcccaggcggtgccgggccgcccgctggccttcggcggccccggcaagactccggac
gaggtggcggccgcgctggctgggggcgtgcagcgcttccacgtggagagcgagtacgaa
ctgcacatgctcgccgagcaggcccgccgcgtcaccccgggcacgcgggtggcggtcctg
ccgcgtttcaacctccccgtgcgggacggttcgctggccggcagcgccctggcgatgggc
ggccggcccacccccttcggcctcgaccccgcgcaggccggtacggtgctccggctgctc
accgacggcacctacccgcacctcgagctgcgcggcgtccacgcccacctggccagcgga
ctcgaggcgcccgaacagctggcggtggcggagacggtcgtcggctgggcgacggacatg
gcgggggagcacggcgtcgggctcggcgaggtcaacgtcggcggcggcatgacggtggac
tacgcggcccccgagcgccgcttcgactgggtcacgtacgggaagggtctggcccggctc
gcacacgcgcatccggaactgacgttgcgcatcgaaccgggccgggcgctgaccgcgtac
tgcggctggtacgccaccgaggtgctggacgtgaagcgcagccacggcgaggagttcgcc
gtggtgcgcggcggcacccaccacctgcggacaccggcgaccaagggccacgaccagccc
tgttccgtgctgccggtggacggctggccccatccgtggccccggccggcggccgaggcc
gaacgggtcacgctcaccggccagttgtgcaccccgaaggacgtcctggcccggcaggta
ccggcaggcggactgcgggccggtgaccgcgtggcgttcgcactcgcgggcgcctacgcg
tggaacatctcccaccacgacttcctcatgcacccccggcccgggttccacttcctgctc
ccggacaggggtgacggcgagccctga
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