Salinimonas marina: IT774_01245
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Entry
IT774_01245 CDS
T07441
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
smaa
Salinimonas marina
Brite
KEGG Orthology (KO) [BR:
smaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smaa03009
]
IT774_01245 (dbpA)
Enzymes [BR:
smaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IT774_01245 (dbpA)
Ribosome biogenesis [BR:
smaa03009
]
Prokaryotic type
rRNA helicases
IT774_01245 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Helicase_C_2
Cas3-like_C_2
P-loop_SecA
UvrD-helicase
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPG05917
UniProt:
A0A7S9HDG7
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All DBs
Position
283239..284618
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AA seq
459 aa
AA seq
DB search
MTQFNTLNLSDNIAGALSSAGFQTMTQVQSVTLPDTLAGRDVLVQASTGSGKTVAFAVAG
LSQIDVTDFRTQLLVLCPTRELAAQVGEQIRLVGRQMANLKVLTLCGGEPMGPQIQSLKH
GASVVVGTPGRLVDHVSRRTLSLAHVKVRVLDEADRMLDMGFADDLARLFSLTPKKVQTL
FFSATYTEQVDKEAQRYLTDPVEHRQVSEDLQKPDIEQLVFRVDDTNRMQVLKGVLSEYQ
PAKAVVFCNRREQVTQVHEMLEDAGFTTQPLQGEMTQPQRNEVLVQFASDSLQVLVATDV
AARGLDVKDIDCVINFAVSEEAEVHIHRIGRTGRAGAKGAAYTLCSEAEEPALGRIEALL
DTALPRKGGQSLRFHANRIKTPEFQCIAVGAGKKQKLRPTDFLGSLTQEAGIEGTDIGKI
TVQSQVSYVAVKQRSVKRAMRQFREGRIKGKKVRARKLG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgactcaatttaatactctcaacctttccgacaatattgcgggcgcactttcttctgcc
ggctttcagactatgacccaggtgcagtcggtcactctgccagacacactggcgggccgt
gatgtgttggttcaggccagcaccggctcaggtaaaaccgtggcctttgcggtggccggg
ttaagtcagattgatgtaaccgactttcgtacacaactgctggtactgtgccccacccgg
gaactggccgcccaggtgggcgagcaaattcggctggtgggccggcaaatggccaatctc
aaagtactgaccttgtgtggtggtgagccgatgggtccccaaatacagtccctcaaacac
ggcgcctcagtggtagtaggcacgcccggacgtctggtagaccatgtaagtcgtcgtacc
ttatcgctggcccatgttaaagtccgggtgctggatgaagctgatcggatgctggatatg
ggctttgccgatgatctggcccggctgttctcactgaccccgaaaaaggtgcaaaccctg
tttttctccgcaacctataccgaacaggtagataaggaagcacaacgctatttaaccgac
ccggtggagcatcgtcaggtgagcgaggacctgcaaaagccggatatcgagcaattggtt
tttcgggttgacgatacgaatcgcatgcaggtattaaagggggtgctgtcagaataccag
cctgccaaagccgtggtattttgtaaccggcgggaacaggtaacccaggtgcatgagatg
ctggaagatgcggggtttaccacccaacccctgcagggggaaatgacccagccacagcgt
aatgaagtgctggttcagtttgccagtgacagcctgcaggtgctggtggctaccgatgtc
gcggcccgtggtttggatgtgaaagatattgactgtgttatcaattttgcggtcagcgaa
gaggccgaagtgcatattcatcgcattggccgcaccggccgggcgggcgccaaaggcgca
gcgtacacgctgtgcagtgaagccgaggagccggcgctggggcggattgaagcattactg
gataccgcattgccgcgtaaagggggccagagtctgcgatttcatgccaaccgaatcaaa
accccggaattccagtgtattgccgtgggcgccggtaaaaagcaaaaactccgacctacc
gactttttgggttcgctgacccaggaggccggtatagaaggcaccgatattggaaaaata
accgtacagagccaggtcagttatgtagcggtaaagcagcgcagtgtaaaacgcgctatg
cgtcagtttcgtgaagggcgcattaaaggcaaaaaagtgagggcgagaaaacttggctaa
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