Salinimonas marina: IT774_01475
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Entry
IT774_01475 CDS
T07441
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
smaa
Salinimonas marina
Brite
KEGG Orthology (KO) [BR:
smaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smaa03021
]
IT774_01475 (rpoH)
Transcription machinery [BR:
smaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IT774_01475 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
HTH_25
HTH_3
HTH_11
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
QPG05958
UniProt:
A0A7S9DYH4
LinkDB
All DBs
Position
337360..338214
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AA seq
284 aa
AA seq
DB search
MSKTMQSMALSVPHNGSIEGYMQAVSSIDMLSAEEERSLALKLREDEDLESARKLVMSHL
RFVVHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPSVGVRLVSFAVHWIKAEIHEFVL
KNWRIVKVATTKAQRKLFFNLRKAKKRLGWFTHDEVQKVADELGVSTKEVLQMEARMSSQ
DQAFDLSADDDENGSFAPVQFLEDKTTDVETDVINQDWDSNANRRLHSAIKTLDARSQDI
IETRWLADNKITLQDLADKYQVSAERVRQIEKNAMKKLQSAMVV
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacaatgcaatcaatggccctttccgttccgcataacggtagcatcgaaggc
tacatgcaggcagtcagctcgatagacatgctgtcggctgaagaggaacgttctctggcg
ttgaaacttcgtgaagatgaagatctggaatcagcacgtaagctggttatgtctcatctg
cgctttgttgtgcatatcgctaaatcctattcaggttatggattacctcaggctgatctt
attcaggaaggtaacattggcctgatgaaagccgttaagcgtttcgacccgtcggttggc
gtgcggttggtttcatttgccgttcactggattaaagccgagattcacgagtttgtactg
aaaaactggcgcatcgttaaagtagccactaccaaagcccagcgtaaattattctttaat
ctgcgtaaggcgaaaaaacggttaggttggtttacccatgacgaagtgcaaaaagtagct
gatgagctgggtgtaagcaccaaagaggtgctgcaaatggaagctcgtatgagtagtcag
gatcaggcatttgacttaagtgctgatgatgatgaaaacggcagctttgccccggtccag
tttttagaagacaaaaccacggatgtggaaactgatgtgattaatcaggactgggactca
aatgccaaccggcgtttgcattcagcaattaaaacgctggatgcccgtagtcaggatatc
atcgaaacacgctggttagcggacaataaaattacgttgcaggatttggctgataagtat
caggtttctgctgagcgggtccgtcagattgaaaaaaatgcaatgaaaaaattgcagtcg
gcgatggtggtctga
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