Salinimonas marina: IT774_05715
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Entry
IT774_05715 CDS
T07441
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
smaa
Salinimonas marina
Brite
KEGG Orthology (KO) [BR:
smaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smaa03016
]
IT774_05715 (rnd)
Enzymes [BR:
smaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IT774_05715 (rnd)
Transfer RNA biogenesis [BR:
smaa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IT774_05715 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
PIN
Motif
Other DBs
NCBI-ProteinID:
QPG06652
UniProt:
A0A7S9HE64
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All DBs
Position
1285394..1286545
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AA seq
383 aa
AA seq
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MDYELITTTAQLNAVCEKAGKCDAIALDTEFVRTRTLTPQLGLLQLYDGEQLVLIDPLAI
DDMSAFVTLLTNPEVVKVLHSCSEDLEAFLNAFETLPTPIYDTQFAAAMLGMGTSLGYAK
LVELLSGVVLDKGESRTDWLARPLSPKQLVYAANDVLYLLPVYRELYQQSEAASKTGWII
EEMAGLGVKKQSQLPLEHAYLPIKNNWKLNPKQLTVLQYLAAWRLQLARQKDIALNFVVK
ETVLLDIALRLPQNRNALSAIDGMIGPTMRRYGDTLVTLVQDALNEFEQLPETRHLPKTR
RLMEFPAYKKTLAKVKSLANDVAQEQAIPVEVVASKKQMNQAIKWYWLTIDETRAQGLQP
DLLSGWRGRLFGDRLTQLLDDSK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggactatgaattaatcaccaccaccgcccagctcaatgcggtgtgtgaaaaggctggc
aaatgcgatgcaattgccctggacaccgaatttgtacgcacccgcacactgactccgcaa
ctggggctattacaactgtacgatggcgaacagctggtgctgatcgatcccttggccatt
gacgatatgtccgcctttgtcacgttgttgaccaaccctgaggtggtgaaagtgctgcac
tcatgctcagaagatttagaagcatttttaaatgcgtttgagacgctgccgacgccaatt
tatgatacccagtttgccgcggcaatgctgggcatgggcacctccttaggttatgcaaaa
ctggtggagttgctaagcggtgtagtgctggataaaggtgagtcaagaaccgactggctg
gcgcggccgctaagtcccaaacaactggtgtatgcggctaatgatgtactgtatttattg
ccggtttaccgtgagctttatcagcaaagcgaagcggccagcaaaaccggttggatcata
gaagaaatggctggactgggggtaaaaaagcaatcgcaattaccgctggaacatgcctat
ttacctatcaagaacaactggaaactcaaccccaaacaattgacggtattgcagtatctg
gcggcgtggcggttacaactggctcggcaaaaggatatcgcacttaattttgtggtcaaa
gaaacggtactgttggatattgcgctgcgcttgccccaaaaccgcaatgccttaagcgcc
attgacggcatgataggcccaaccatgcgccgttatggagatacgctggtgaccctggtg
caagacgccctgaacgagtttgaacaattgccagaaacccggcatttgcctaaaacccgg
cgcctgatggaatttccagcatacaaaaagaccttggcaaaagtaaaatcacttgccaat
gacgtggctcaggaacaggcgatcccggtcgaagtggtggcgtctaaaaaacagatgaac
caggccataaaatggtattggctcacgatagatgaaacccgggctcagggcttgcagcct
gatttgctaagcggctggcggggccggctgttcggtgaccggttaacccaacttttagat
gactctaaatag
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