Salinimonas marina: IT774_06335
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Entry
IT774_06335 CDS
T07441
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
smaa
Salinimonas marina
Pathway
smaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IT774_06335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smaa03019
]
IT774_06335
Messenger RNA biogenesis [BR:
smaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IT774_06335
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QPG06755
UniProt:
A0A7S9HE13
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All DBs
Position
1423866..1425179
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AA seq
437 aa
AA seq
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MNMNLYGHNGHWLMVDCGVSFDEPLVAPYRESQSAAEAGEKIQVVAADPGFITAQKEHLC
GIIITHAHEDHVGALPYLWPRLKCPVYTTRFTAEVLRRKLAETGLEGKVPIIEVDSHSLC
RIGPFDVSWLAVTHSIPEPYALKISTPAGVVLHTADWKIDAQPITGKPFDPKLYRRLKEE
NILAMVGDSTNATKPGFSISERNCYDGLLATIRPQVGRVVVSCFGSNIARLISLAYVAKN
TNRYMALFGRSLLNMYSIARKMGLWPDDLSLVEPSHLGYLPPHEVLAVATGSQGEARAAL
GRIAKDSHPHLTLDKGDMVIFSSIIIPGNETAVTGLVRQFEAQGVTTLLSENSTLPIHAS
GHPCAEELALMYEWVRPQIAIPVHGEPEHLEAHAMVAKATGVRKRQVGLNGDLYRLAPLP
SIRRQVVKTGRIALRRE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaatctgtacggacataatggccactggcttatggtggactgtggtgtcagt
ttcgatgaaccattagttgccccttatcgcgaaagtcagagcgccgctgaggccggagaa
aagattcaggttgtggcagccgatcctggctttatcacggcgcaaaaagaacatctctgc
ggtatcattatcacccatgcccatgaggaccatgtaggggctctgccttatttatggccg
aggttgaagtgccccgtttataccacgcgcttcaccgcagaagtgttacgccgaaaacta
gccgaaaccggcctggaaggaaaagtaccgattatagaagtggacagtcacagcctctgc
cgaattggtccgtttgatgtcagctggcttgcggtaacacactcaatacctgaaccctat
gcgcttaaaatctcgacgccggctggcgtcgtgctgcataccgcagactggaaaattgat
gcgcaacccattaccggcaaaccctttgaccctaagctttaccggcgtttgaaggaagaa
aacattctggcgatggtgggcgattccaccaatgccaccaaaccaggcttttctatttct
gagcgaaactgctatgacggactgttggccaccatacgtcctcaggttgggcgggtagtg
gtcagttgctttggcagtaacatcgcccgtttaatttcacttgcctatgtggcgaaaaat
accaatcgctatatggcgttgttcggccgctcgttacttaatatgtacagtatcgcccgt
aaaatggggctctggcctgacgatttatctctggtagagccttcacatcttggttatttg
cctcctcacgaggtgctggccgtggctaccggcagtcagggcgaagcaagggccgcgctg
ggtcgtatcgccaaagactcacatccgcatttgacgttggacaaaggtgacatggtcatt
ttttccagcattattattccggggaatgagacggcggtgaccgggctggtgcgtcagttt
gaagcgcagggggttactaccctgctaagtgaaaatagtactttgccaatccatgccagt
ggtcacccgtgcgccgaagagctggcattgatgtatgagtgggtgcgaccgcaaattgcc
attccggtgcatggagagcctgaacatcttgaggcgcatgcaatggtagccaaagccacc
ggtgtacgaaagcgtcaggtaggcttaaatggagatctctatcgtttagcgccacttccc
agtattcgtcgacaagtggttaaaaccggtcggattgcgcttagacgcgagtaa
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