Salinimonas marina: IT774_09445
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Entry
IT774_09445 CDS
T07441
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smaa
Salinimonas marina
Brite
KEGG Orthology (KO) [BR:
smaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smaa03032
]
IT774_09445 (topA)
03400 DNA repair and recombination proteins [BR:
smaa03400
]
IT774_09445 (topA)
Enzymes [BR:
smaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IT774_09445 (topA)
DNA replication proteins [BR:
smaa03032
]
Prokaryotic type
DNA Topoisomerases
IT774_09445 (topA)
DNA repair and recombination proteins [BR:
smaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IT774_09445 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Zn_ribbon_LysW
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QPG04479
UniProt:
A0A7S9DV39
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Position
complement(2140450..2143089)
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AA seq
879 aa
AA seq
DB search
MAKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTKALGQVEPKKPAKELKTLSEE
ERSEYLRNYEYRKLVDRMGVDPQQNWHAHYQVLQGKEKVVNELKKLAKDADTIYLATDLD
REGEAIAWHLQELLGTKDKTYQRVVFNEITKNAIQEAFSSPGEVNVARVNAQQARRFLDR
VVGFMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWDIHADLQAKKNTA
LRMLVNKYQNKAFKPVNKEQADTAVNELQAQNYVVQSRESKPTQSKPSAPYITSTLQQAA
STRLGFGVKKTMMMAQRLYEAGHITYMRTDSTNLSQEALDTCRSFIDDKFGNKYLPDNPI
RYGSKEGAQEAHEAIRPSNVAVKADSLGDMERDAQRLYELIWRQFVACQMTPAKYDATTI
KVAAGDYELVAKGRVLKFDGWTKVQPQLRKKGEEDLLLPDVQQGDTLDLSALDPKQHFTK
PVARYNEASLVKELEKRGIGRPSTYASIISTIQDRGYVRLDSKRFYAEKMGEIVNDRLTD
NFVDLMSYDFTANMEQQLDDIAGGQKDWKQVLNEFYEDFYNKLLKAEKDAEEGGMQPNQA
IPAGIACGTCGREMNVRTASTGVFLGCSGYNLPPKERCTNTMNLTPGDEVIKVDDEEEME
TEVLRSKRRCQVCGTAMDSYLVDETRKLHVCGNVPSCDGTYVESGTFKIKGYDGPIIECD
KCGSDMELKNGRFGKYFGCTNSECKNTRKLLRNGEAAPPKEDPVDLPELPCEKTDAHFVL
RDGASGIFMAAHNFPKSRETRAPKVEELARFRDRISPKFYYLADAPQQDPDGNPTIVRFS
RKTKQQYVMSENDNGKSTGWSAWYENGKWVAKDTRKKSK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcactggtcatcgtcgagtctccggccaaagcaaaaacgataaataaatat
cttggtaaagattttatcgttaaatcttcagtaggccacgttcgagatctgccaaccaaa
gcattagggcaggtggagccgaaaaaaccggcaaaagaacttaagacattatctgaggaa
gagcgctcagaatatttgcgcaactacgagtatcgcaaactggtcgatcgcatgggggtc
gatcctcagcaaaactggcatgcgcattatcaggtgcttcaaggtaaagaaaaagttgtc
aacgagcttaaaaaactggccaaagacgccgacactatctatctggcaacggatttggat
agagaaggagaggccattgcctggcatctgcaagagctgttgggaaccaaagacaaaacc
tatcagcgggtggtatttaatgaaatcaccaaaaatgccattcaggaagccttttccagc
cccggcgaagtaaatgtcgctcgggtaaatgcacagcaggcccgtcgttttctggatcgg
gtggttggctttatggtttcgccgctgctatggaaaaagattgcccgggggctgtcagcc
ggtcgggttcagtcagtcgccgtacggttggtggttgaacgtgagcgcgaaattaaagcc
tttgtgccagaggagttctgggacattcacgcagatttgcaggctaagaaaaataccgcg
ttgcgcatgctggtaaataaataccagaacaaagcgtttaaaccggtaaataaagaacag
gcggataccgcggtaaacgagctgcaggcccaaaactatgtggtacaaagccgcgagtca
aaacctacccaaagtaagccctcagcgccttatattacgtcgacgctgcaacaggccgcc
agtacccgcttaggtttcggggttaaaaagaccatgatgatggcccagcgtttgtatgaa
gccggtcacatcacctatatgcgtaccgactcgaccaatcttagtcaggaagcattggat
acctgccgtagttttattgacgataagtttggcaataagtatctgcctgacaacccgatt
cgctatggcagcaaggaaggcgcacaggaagctcacgaagcaatccgaccttctaatgtg
gcggtgaaagccgacagcctgggagatatggagcgggacgctcagcgtctttacgagctc
atttggcgtcagtttgtggcgtgccagatgaccccggcaaaatatgatgccaccaccatc
aaagtggccgccggtgactatgaactggtagccaaaggccgggttctgaaatttgacggt
tggaccaaagtacagccgcagctgcgcaaaaagggcgaagaagatctgctgctgcctgat
gtacagcagggcgataccctggacttgagcgcgttggatccaaaacagcactttactaag
ccggtggcgcgttacaatgaagcatcgctggtaaaagagctggaaaaacggggcattggc
cggccatctacttatgccagcattatctcgacgatccaggatcgcggctatgtgcggctt
gactcaaaacgcttttatgccgagaaaatgggcgagattgtcaatgaccgtctgaccgat
aattttgtcgacttaatgagttatgacttcaccgccaacatggaacagcagctggatgat
attgccggtggccagaaagactggaaacaggttttaaacgagttttacgaagacttttac
aataagttgttaaaagcagaaaaagatgcagaagaaggcggaatgcagccaaaccaggcg
attccggcgggcattgcttgcggtacctgtggtcgtgaaatgaatgtgcgtaccgccagt
accggcgtatttttagggtgttcaggttacaatctgccgcccaaagagcgttgtaccaat
accatgaatctgaccccgggtgacgaggttatcaaggtcgatgatgaagaggaaatggaa
accgaagtactgcgttctaaacgccggtgtcaggtttgtggtaccgccatggacagctat
ctggtcgatgaaacccgcaaattacatgtttgtggcaatgtgccttcgtgtgatggaacc
tatgtcgagtctggtacgtttaagattaaagggtatgacggtcctattatcgaatgcgac
aagtgtggcagcgatatggaacttaaaaacggacgctttggaaaatactttgggtgtacc
aatagtgagtgtaaaaatacccgtaaactattgagaaatggtgaggctgcgccacccaag
gaagatccggtggacttacccgaactgccctgcgaaaaaaccgatgcccactttgtactg
cgcgatggcgcctcaggtattttcatggctgctcacaattttccaaagtctcgggaaacc
cgggcgcctaaagttgaggaactggctcggttccgggatcgtatctcgccaaaattttat
tatctggcggatgccccgcagcaggatccggacggcaatccaacgattgtgcgcttcagt
cgtaaaacaaagcaacagtatgttatgtcagaaaatgacaatgggaaatctaccggctgg
tcagcctggtatgaaaacggtaaatgggtagcaaaagatacccgtaaaaaaagtaaataa
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